RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 LINGO4Q6UY18 593 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 RBM44Q6ZP01 1051 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 SYVN1Q86TM6 617 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 EFHBQ8N7U6 833 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 CD200R1Q8TD46 325 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 BPIFA1Q9NP55 256 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 GMPR2Q9P2T1 348 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 ABCD2Q9UBJ2 740 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 ZNF225Q9UK10 706 aa18.23■□□□□ 0.51
SEMA3B-209ENST00000456560 CLPTM1O96005 669 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 AGTR2P50052 363 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 ECT2LQ008S8 904 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 VPS26BQ4G0F5 336 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 ISLR2Q6UXK2 745 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 MINDY1Q8N5J2 469 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 ZNF461Q8TAF7 563 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 TRMT2BQ96GJ1 504 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 IGSF21Q96ID5 467 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 DEFB118Q96PH6 123 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 TRMT6Q9UJA5 497 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 GPR45Q9Y5Y3 372 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 SCN5AQ14524 2016 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 H0YJX3 145 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 FXYD1O00168 92 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 PFDN6O15212 129 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 FZD6O60353 706 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 IDO1P14902 403 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 PRDX3P30048 256 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 CLCN2P51788 898 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 ADARP55265 1226 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 PABPC1LQ4VXU2 614 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 ZRANB3Q5FWF4 1079 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 PRMT9Q6P2P2 845 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 BLOC1S3Q6QNY0 202 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 SPATA19Q7Z5L4 167 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 GALNT4Q8N4A0 578 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 EEF1AKMT1Q8WVE0 214 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 LRTOMTQ8WZ04 291 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 SCLYQ96I15 445 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 TMCO1Q9UM00 188 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 TIMM22Q9Y584 194 aa18.22■□□□□ 0.51
SEMA3B-209ENST00000456560 NME4O00746 187 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 ESRRBO95718 433 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 C1RP00736 705 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 ASLP04424 464 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 MZF1P28698 734 aaPredicted RBP18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 IL2P60568 153 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 PLD1Q13393 1074 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 INO80DQ53TQ3 878 aaPredicted RBP18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 XKR7Q5GH72 579 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 COQ5Q5HYK3 327 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 PITRM1Q5JRX3 1037 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 CYP2R1Q6VVX0 501 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 DHFR2Q86XF0 187 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 HERC6Q8IVU3 1022 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 KCNJ9Q92806 393 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 ZUFSPQ96AP4 578 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 P2RY12Q9H244 342 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 IRAK4Q9NWZ3 460 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 PTTG2Q9NZH5 202 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 PCDHGB4Q9UN71 923 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 YIPF1Q9Y548 306 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 PCDHGB5Q9Y5G0 923 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 OR51B4Q9Y5P0 310 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 COMMD10Q9Y6G5 202 aa18.21■□□□□ 0.51
SEMA3B-209ENST00000456560 A0A0U1RQS6 177 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 CCDC160A6NGH7 325 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 VILLO15195 856 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 CXCL10P02778 98 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 UROSP10746 265 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 PTGER3P43115 390 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 GRIK2Q13002 908 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 UGT3A1Q6NUS8 523 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 EFL1Q7Z2Z2 1120 aaKnown RBP18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 SLC15A3Q8IY34 581 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 TSPEARQ8WU66 669 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 LINGO1Q96FE5 620 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 ZFRQ96KR1 1074 aaKnown RBP18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 SLC2A11Q9BYW1 496 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 RNF208Q9H0X6 261 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 IL17CQ9P0M4 197 aa18.21■□□□□ 0.5
SEMA3B-209ENST00000456560 ANAPC1Q9H1A4 1944 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 NCF1BA6NI72 391 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 NCF1CA8MVU1 366 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 ANGPT2O15123 496 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 CRCPO75575 148 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 MLYCDO95822 493 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 TFAP2AP05549 437 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 HSPA8P11142 646 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 NCF1P14598 390 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 LBX1P52954 281 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 DIO3P55073 304 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 AARS2Q5JTZ9 985 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 C6orf52Q5T4I8 152 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 TPGS2Q68CL5 300 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 KIAA1841Q6NSI8 718 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 GPSM1Q86YR5 675 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 PBXIP1Q96AQ6 731 aa18.2■□□□□ 0.5
SEMA3B-209ENST00000456560 EID2BQ96D98 161 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms