RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 TRPC5OSA6NMA1 111 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 IL1BP01584 269 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 THRAP10827 490 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 HGFP14210 728 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TIAL1Q01085 375 aaKnown RBP eCLIP15.13■□□□□ 0.014e-6■■■□□ 15.5
GTF2IRD1-203ENST00000455841 LAMB3Q13751 1172 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 MAP7D1Q3KQU3 841 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 CTSL3PQ5NE16 218 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TMC8Q8IU68 726 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 KYQ8NBH2 561 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 OR52B6Q8NGF0 335 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 ITFG1Q8TB96 612 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TWIST2Q8WVJ9 160 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PYCR2Q96C36 320 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 EBF3Q9H4W6 596 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 IL26Q9NPH9 171 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 EME2A4GXA9 379 aaPredicted RBP15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TTC34A8MYJ7 566 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 IMPDH1P20839 514 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 SNRPD1P62314 119 aaKnown RBP15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 CLCQ05315 142 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 FRG1Q14331 258 aaKnown RBP15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 ARHGAP15Q53QZ3 475 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 LPCAT4Q643R3 524 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 C19orf60Q96EN9 201 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 CNDP1Q96KN2 507 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NSUN3Q9H649 340 aaKnown RBP15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 WDR41Q9HAD4 459 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 STOML1Q9UBI4 398 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 ITM2BQ9Y287 266 aa15.13■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PSMD12O00232 456 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TPST1O60507 370 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 BPIP17213 487 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 OGNP20774 298 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TNK2Q07912 1038 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 CAPRIN1Q14444 709 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 RFTN1Q14699 578 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 WASHC2DQ5SRD0 308 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TTC30BQ8N4P2 665 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 BIRC8Q96P09 236 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NOTCH4Q99466 2003 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PCDHAC1Q9H158 963 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NDE1Q9NXR1 346 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 RGSL1A5PLK6 1076 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TRAFD1O14545 582 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 AZIN1O14977 448 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PABPC1P11940 636 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PTPN2P17706 415 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 THOP1P52888 689 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 HERVK_113P63132 956 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 ARSIQ5FYB1 569 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 C22orf39Q6P5X5 142 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 MRPL43Q8N983 215 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 GPR26Q8NDV2 337 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PIH1D2Q8WWB5 315 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 SMG7Q92540 1137 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 CCDC126Q96EE4 140 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 ERVK-6Q9BXR3 956 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 AKTIPQ9H8T0 292 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 MED16Q9Y2X0 877 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 WASH3PC4AMC7 463 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 RFXAPO00287 272 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NVLO15381 856 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 S100BP04271 92 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 MTHFD2P13995 350 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 ZNF7P17097 686 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 CEBPBP17676 345 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 XRCC1P18887 633 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 BMPR1AP36894 532 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 DIO3P55073 304 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 MESP2Q0VG99 397 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NOL11Q9H8H0 719 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 RC3H2Q9HBD1 1191 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 WWOXQ9NZC7 414 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 DNAJC15Q9Y5T4 150 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
GTF2IRD1-203ENST00000455841 A0A0J9YYE9 177 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 GREM1O60565 184 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 DNAJA2O60884 412 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TRBC1P01850 177 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TRIP10Q15642 601 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 VPS26BQ4G0F5 336 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 LRRC74BQ6ZQY2 392 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 Q6ZVL8 140 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TRIM74Q86UV6 250 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 KLHDC8BQ8IXV7 354 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 VPS33AQ96AX1 596 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 RAD9AQ99638 391 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 MRPL1Q9BYD6 325 aaKnown RBP15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NMRK1Q9NWW6 199 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 B4GALT6Q9UBX8 382 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 POMPQ9Y244 141 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 CPOXP36551 454 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 NNMTP40261 264 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 PPP3CCP48454 512 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 FLOT2Q14254 428 aa15.11■□□□□ 0.01
GTF2IRD1-203ENST00000455841 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms