RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 IYDQ6PHW0 289 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FBXO38Q6PIJ6 1188 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 WDR74Q6RFH5 385 aaPredicted RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 XKR5Q6UX68 686 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 C6orf15Q6UXA7 325 aaPredicted RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 IRF2BP2Q7Z5L9 587 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RASGRP3Q8IV61 690 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRIM48Q8IWZ4 208 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ESX1Q8N693 406 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SPOCK2Q92563 424 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 EID2BQ96D98 161 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 C9orf72Q96LT7 481 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PPM1MQ96MI6 270 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF599Q96NL3 588 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PLEKHG4BQ96PX9 1271 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TEFMQ96QE5 360 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ERGIC2Q96RQ1 377 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NRTNQ99748 197 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SPATA16Q9BXB7 569 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MFRPQ9BY79 579 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 B3GNT4Q9C0J1 378 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 POLR1EQ9GZS1 481 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 THAP2Q9H0W7 228 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STN1Q9H668 368 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LRRC4CQ9HCJ2 640 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SARS2Q9NP81 518 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MAP10Q9P2G4 905 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PDP2Q9P2J9 529 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LIMA1Q9UHB6 759 aaKnown RBP5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ANAPC7Q9UJX3 599 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 POLQO75417 2590 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CROCCQ5TZA2 2017 aa5.91□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CSMD2Q7Z408 3487 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TTLL8A6PVC2 850 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 EIF3CLB5ME19 914 aaKnown RBP5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MKRN2OSH3BPM6 223 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MASP2O00187 686 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZW10O43264 779 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GRID2O43424 1007 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KRT86O43790 486 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MTA2O94776 668 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 UBXN7O94888 489 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MMP2P08253 660 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 BRAFP15056 766 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FOLR1P15328 257 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TEAD1P28347 426 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CA5AP35218 305 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PTGIRP43119 386 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SPINT3P49223 89 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FOXL2P58012 376 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TAS2R40P59535 323 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GALNT2Q10471 571 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SQSTM1Q13501 440 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DPYSL3Q14195 570 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STX1AQ16623 288 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SMYD5Q6GMV2 418 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CAPRIN2Q6IMN6 1127 aaKnown RBP5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PWWP2BQ6NUJ5 590 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF765Q7L2R6 523 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SLC9B2Q86UD5 537 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ATCAYQ86WG3 371 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRAPPC5Q8IUR0 188 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF547Q8IVP9 402 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMEM151BQ8IW70 566 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CCDC13Q8IYE1 715 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 BBS5Q8N3I7 341 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TEX19Q8NA77 164 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GPR26Q8NDV2 337 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 EXD1Q8NHP7 514 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ARRDC2Q8TBH0 407 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CPT1CQ8TCG5 803 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NSMCE1Q8WV22 266 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 EIF3CQ99613 913 aaKnown RBP5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HERPUD2Q9BSE4 406 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NUP85Q9BW27 656 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PCDH9Q9HC56 1237 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CASS4Q9NQ75 786 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FBXO8Q9NRD0 319 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RBM22Q9NW64 420 aaKnown RBP eCLIP5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DONSONQ9NYP3 566 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 VPS18Q9P253 973 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF624Q9P2J8 865 aaPredicted RBP5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PSMD13Q9UNM6 376 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 POLHQ9Y253 713 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 WDR37Q9Y2I8 494 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SPO11Q9Y5K1 396 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ADGRG1Q9Y653 693 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CFAP20Q9Y6A4 193 aaKnown RBP5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 F8P00451 2351 aa5.9□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CCDC168Q8NDH2 2452 aa5.9□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SEC16AO15027 2179 aa5.9□□□□□ -1.47
HLA-DPA3-207ENST00000454398 POLEQ07864 2286 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IGHV5-51A0A0C4DH38 117 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KIR2DS5A0A0G2JLQ3 304 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 A0A0G2JNG1 304 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 A6NL46 340 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KIR2DS3K7RE56 304 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AURKAO14965 403 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 BUD23O43709 281 aaKnown RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NUAK1O60285 661 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms