RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 SLC46A1Q96NT5 459 aa14.39□□□□□ -0.11
HSPG2-207ENST00000453796 APOL2Q9BQE5 337 aa14.39□□□□□ -0.11
HSPG2-207ENST00000453796 FOXP3Q9BZS1 431 aa14.39□□□□□ -0.11
HSPG2-207ENST00000453796 ARNT2Q9HBZ2 717 aa14.39□□□□□ -0.11
HSPG2-207ENST00000453796 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.39□□□□□ -0.11
HSPG2-207ENST00000453796 SLC23A2Q9UGH3 650 aa14.39□□□□□ -0.11
HSPG2-207ENST00000453796 KCNK6Q9Y257 313 aa14.39□□□□□ -0.11
HSPG2-207ENST00000453796 ARL5AQ9Y689 179 aa14.39□□□□□ -0.11
HSPG2-207ENST00000453796 RHPN2P1A8MT19 583 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 GPR39O43194 453 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 PPFIA2O75334 1257 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 MTX2O75431 263 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 METTL18O95568 372 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 CD1CP29017 333 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 INHBCP55103 352 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 SQSTM1Q13501 440 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 PRPSAP1Q14558 356 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 PTPRCAPQ14761 206 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 TAF1AQ15573 450 aaPredicted RBP14.38□□□□□ -0.11
HSPG2-207ENST00000453796 OASLQ15646 514 aaKnown RBP14.38□□□□□ -0.11
HSPG2-207ENST00000453796 CHRNA6Q15825 494 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 PARP6Q2NL67 630 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 COL28A1Q2UY09 1125 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 IYDQ6PHW0 289 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 C19orf48Q6RUI8 117 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 C11orf96Q7Z7L8 435 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 FAM71DQ8N9W8 422 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 HNRNPLLQ8WVV9 542 aaKnown RBP14.38□□□□□ -0.11
HSPG2-207ENST00000453796 RTP4Q96DX8 246 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 TMEM74Q96NL1 305 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 PPP1R2P1Q96PQ5 205 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 PKP3Q9Y446 797 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 FAM208BQ5VWN6 2430 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 NBEAQ8NFP9 2946 aa14.38□□□□□ -0.11
HSPG2-207ENST00000453796 PTPRQQ9UMZ3 2332 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 ITPR1Q14643 2758 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 IGHV1OR21-1A0A087WYE8 117 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 GLYATL1P3A0A0U1RQE8 302 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 TMX2-CTNND1H3BSU7 103 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 KMOO15229 486 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A9O60656 530 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 CDK14O94921 469 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 CPNE6O95741 557 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 CCDC175P0C221 793 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 F3P13726 295 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A6P19224 532 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 LPOP22079 712 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A1P22309 533 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A4P22310 534 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 ITPKBP27987 946 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 ALDH4A1P30038 563 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A3P35503 534 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A5P35504 534 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 MLLT3P42568 568 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-207ENST00000453796 CFHR1Q03591 330 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 TMEM115Q12893 351 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-207ENST00000453796 EIF3IQ13347 325 aaKnown RBP14.37□□□□□ -0.11
HSPG2-207ENST00000453796 CLPPQ16740 277 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-207ENST00000453796 SEL1L2Q5TEA6 688 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 FAM151BQ6UXP7 276 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 ZNF574Q6ZN55 896 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-207ENST00000453796 CLEC14AQ86T13 490 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 LRRTM4Q86VH4 590 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 BRSK1Q8TDC3 778 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 ATG4AQ8WYN0 398 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 C19orf43Q9BQ61 176 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 TBL1YQ9BQ87 522 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 NUDT22Q9BRQ3 303 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 TIMM29Q9BSF4 260 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A7Q9HAW7 530 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A10Q9HAW8 530 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 UGT1A8Q9HAW9 530 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 RDH14Q9HBH5 336 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 EPB41L5Q9HCM4 733 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 SARS2Q9NP81 518 aaKnown RBP14.37□□□□□ -0.11
HSPG2-207ENST00000453796 SMOXQ9NWM0 555 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 KCTD3Q9Y597 815 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 PIKFYVEQ9Y2I7 2098 aa14.37□□□□□ -0.11
HSPG2-207ENST00000453796 LOC400499M0QZD8 3231 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 TRBV23OR9-2A0A075B6M9 112 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 AGAP14A8MT82 685 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 PLD2O14939 933 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 STX7O15400 261 aaKnown RBP14.36□□□□□ -0.11
HSPG2-207ENST00000453796 LIASO43766 372 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
HSPG2-207ENST00000453796 ZNF7P17097 686 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-207ENST00000453796 PCBP4P57723 403 aaKnown RBP14.36□□□□□ -0.11
HSPG2-207ENST00000453796 XIAPP98170 497 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 HHEXQ03014 270 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 ITGA9Q13797 1035 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 SPARCL1Q14515 664 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 SIX1Q15475 284 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-207ENST00000453796 CRTC3Q6UUV7 619 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 ARHGEF18Q6ZSZ5 1173 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 RAB11FIP2Q7L804 512 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 PIM3Q86V86 326 aa14.36□□□□□ -0.11
HSPG2-207ENST00000453796 SLC13A5Q86YT5 568 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms