RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 CLPTM1LQ96KA5 538 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 DENND2DQ9H6A0 471 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 MSRAQ9UJ68 235 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 CAPN8A6NHC0 703 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 GABRDO14764 452 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 GOT2P00505 430 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 ITPKAP23677 461 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 MYL9P24844 172 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 RALGDSQ12967 914 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 GTF2H2Q13888 395 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 GTF2H2CQ6P1K8 395 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 KIAA1324Q6UXG2 1013 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 ZNF781Q8N8C0 355 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 SCAIQ8N9R8 606 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 APOLD1Q96LR9 279 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 TSSK3Q96PN8 268 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 GATA5Q9BWX5 397 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 EXD2Q9NVH0 621 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 DTLQ9NZJ0 730 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 GNEQ9Y223 722 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 ZFP37Q9Y6Q3 630 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
SMARCA4-205ENST00000450717 NR2F6P10588 404 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 BUD31P41223 144 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 LIPEQ05469 1076 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 SULT1C3Q6IMI6 304 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 POC5Q8NA72 575 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 SLC35B2Q8TB61 432 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 BORCS5Q969J3 196 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 LENG8Q96PV6 779 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 C12orf65Q9H3J6 166 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 AJAP1Q9UKB5 411 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 UGT2B17O75795 530 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 ESR1P03372 595 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 ALOX5P09917 674 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 CDH5P33151 784 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 VPS26BQ4G0F5 336 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 VWA5B1Q5TIE3 1220 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 DENND5AQ6IQ26 1287 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 ESRP1Q6NXG1 681 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 UBR7Q8N806 425 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 HIPK3Q9H422 1215 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 ETAA1Q9NY74 926 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 FBXL21Q9UKT6 434 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 LRRC14BA6NHZ5 514 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 H3BM21 787 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 FPGTO14772 594 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 CBFA2T3O75081 653 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 EOMESO95936 686 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 FABP3P05413 133 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 CAPN1P07384 714 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 ITGAXP20702 1163 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 GPD2P43304 727 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 TAF1AQ15573 450 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 DEFB115Q30KQ5 88 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 IL23RQ5VWK5 629 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 CRTC3Q6UUV7 619 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 SMYD1Q8NB12 490 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 SMPD3Q9NY59 655 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 DUOX1Q9NRD9 1551 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 H0Y858 1186 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 DNM1LO00429 736 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 ASLP04424 464 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 FAM163BP0C2L3 166 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 HNF4AP41235 474 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 PTGER3P43115 390 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 TAS2R41P59536 307 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 DAW1Q8N136 415 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 NAT8LQ8N9F0 302 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 CENPNQ96H22 339 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 PPM1MQ96MI6 270 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 HAPLN3Q96S86 360 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 OSBPL7Q9BZF2 842 aa13.12□□□□□ -0.31
SMARCA4-205ENST00000450717 NDUFS2O75306 463 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 PRAMEF1O95521 474 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 CAPGP40121 348 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 SLC18A1P54219 525 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 QPRTQ15274 297 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 CIB1Q99828 191 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 ALG2Q9H553 416 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 TIMM22Q9Y584 194 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 FOXO6A8MYZ6 492 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 IGFBP5P24593 272 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 KCNA10Q16322 511 aa13.11□□□□□ -0.31
SMARCA4-205ENST00000450717 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms