RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SGTBQ96EQ0 304 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CERS2Q96G23 380 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MARK4Q96L34 752 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CCDC115Q96NT0 180 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RPRD1AQ96P16 312 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 COL21A1Q96P44 957 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MOGAT1Q96PD6 335 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DUSP9Q99956 384 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 MRPL57Q9BQC6 102 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 C11orf70Q9BRQ4 267 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 UCK2Q9BZX2 261 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 POLR1EQ9GZS1 481 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 SIK2Q9H0K1 926 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SEMA6BQ9H3T3 888 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NCOR1P1Q9H4R4 102 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MAGIXQ9H6Y5 334 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RNF121Q9H920 327 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PRMT8Q9NR22 394 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 FBXO8Q9NRD0 319 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CTPS2Q9NRF8 586 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SMOXQ9NWM0 555 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SDHAF2Q9NX18 166 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FNIP2Q9P278 1114 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 EBF1Q9UH73 591 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC39A10Q9ULF5 831 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 STAP1Q9ULZ2 295 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 COG5Q9UP83 839 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ICKQ9UPZ9 632 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RNF6Q9Y252 685 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 AAR2Q9Y312 384 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 PCYT1BQ9Y5K3 369 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 NUBP2Q9Y5Y2 271 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FMN2Q9NZ56 1722 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TMEM131LA2VDJ0 1609 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC35F4A4IF30 521 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 C3orf70A6NLC5 250 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 PTGES3LE9PB15 166 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NARSO43776 548 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 SCN2BO60939 215 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RFPL1O75677 317 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PET100P0DJ07 73 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CKMT1AP12532 417 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CYP3A5P20815 502 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MSR1P21757 451 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ITGA6P23229 1130 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GLRA2P23416 452 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 EVI2BP34910 448 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HOXD13P35453 343 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GEMP55040 296 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PKNOX1P55347 436 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DCDC1P59894 354 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GPR85P60893 370 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ALDH6A1Q02252 535 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 GCNT1Q02742 428 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PRKG2Q13237 762 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TSTA3Q13630 321 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 ELOAQ14241 798 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 TIGD6Q17RP2 521 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FAM102BQ5T8I3 360 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 C1orf189Q5VU69 101 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ZNF470Q6ECI4 717 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FAM199XQ6PEV8 388 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 CRTC1Q6UUV9 634 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DNAJC14Q6Y2X3 702 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 TIFABQ6ZNK6 161 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 EEPD1Q7L9B9 569 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TRIM46Q7Z4K8 759 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SIAH1Q8IUQ4 282 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TCTE3Q8IZS6 198 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HDDC3Q8N4P3 179 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LINC00469Q8N7U9 141 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TTLL6Q8N841 843 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MCPH1Q8NEM0 835 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TTLQ8NG68 377 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OR1M1Q8NGA1 313 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OR4C6Q8NH72 309 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SPATA22Q8NHS9 363 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ZSCAN18Q8TBC5 510 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 OXER1Q8TDS5 423 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 IGDCC4Q8TDY8 1250 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SETD7Q8WTS6 366 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 PIH1D2Q8WWB5 315 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SGCDQ92629 289 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TMEM203Q969S6 136 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RAD51AP1Q96B01 352 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 BTF3L4Q96K17 158 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CAMKK2Q96RR4 588 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ZNF251Q9BRH9 671 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 EPB41L4BQ9H329 900 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MROH8Q9H579 483 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ZFYVE1Q9HBF4 777 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLCO1B3Q9NPD5 702 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MARK1Q9P0L2 795 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TJP2Q9UDY2 1190 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PGAP2Q9UHJ9 254 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OGDHLQ9ULD0 1010 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ST3GAL5Q9UNP4 418 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NME7Q9Y5B8 376 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OAS3Q9Y6K5 1087 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 NFASCO94856 1347 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms