RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 LIPIQ6XZB0 460 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 ATG14Q6ZNE5 492 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 Q6ZVL8 140 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 TECPR1Q7Z6L1 1165 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 SLC22A9Q8IVM8 553 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 WDR75Q8IWA0 830 aaKnown RBP14.12□□□□□ -0.15
USP39-207ENST00000450066 MICALL1Q8N3F8 863 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 CLDN19Q8N6F1 224 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 GIMAP7Q8NHV1 300 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 KIAA1191Q96A73 305 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 SPATA16Q9BXB7 569 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 ABCF3Q9NUQ8 709 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 NCKIPSDQ9NZQ3 722 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 CD84Q9UIB8 345 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 DNAJC16Q9Y2G8 782 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 STON1Q9Y6Q2 735 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 ANTXRLA6NF34 631 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 A8MT66 165 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 IQCF5A8MTL0 148 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 C1QTNF3-AMACRE9PGA6 284 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 H3BQ06 376 aaPredicted RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 DCTN3O75935 186 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 HSPA4LO95757 839 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 RGS19P49795 217 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 CCDC15Q0P6D6 951 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 RCN2Q14257 317 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 PIWIL4Q7Z3Z4 852 aaKnown RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 GBP7Q8N8V2 638 aaPredicted RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 STAG3L4Q8TBR4 150 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 PDLIM5Q96HC4 596 aaKnown RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 ZSCAN5AQ9BUG6 496 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 TMEM120AQ9BXJ8 343 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 ZDHHC4Q9NPG8 344 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 DYRK4Q9NR20 520 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 MARCOQ9UEW3 520 aaPredicted RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 PRSS21Q9Y6M0 314 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 NEMP2A6NFY4 417 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 K7EQS6 105 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 AREL1O15033 823 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 SPINT1O43278 529 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 NPHS1O60500 1241 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 SNUPNO95149 360 aaKnown RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 KITP10721 976 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 ADRB3P13945 408 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 KCNA5P22460 613 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 SERPINB5P36952 375 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 NFKB2Q00653 900 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 OR4D1Q15615 310 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 HENMT1Q5T8I9 393 aaKnown RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 TRIM67Q6ZTA4 783 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 MMAAQ8IVH4 418 aaKnown RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 CHPFQ8IZ52 775 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 NRSN1Q8IZ57 195 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 TRAM1L1Q8N609 369 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 FITM2Q8N6M3 262 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 ZNF513Q8N8E2 541 aaPredicted RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 EEF1AKMT1Q8WVE0 214 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 INPP5DQ92835 1189 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 SCAMP4Q969E2 229 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 ATOH8Q96SQ7 321 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 HDAC8Q9BY41 377 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 SARS2Q9NP81 518 aaKnown RBP14.11□□□□□ -0.15
USP39-207ENST00000450066 TRPV5Q9NQA5 729 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 TMPRSS11EQ9UL52 423 aa14.11□□□□□ -0.15
USP39-207ENST00000450066 GRXCR2A6NFK2 248 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 KERAO60938 352 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 SMIM24O75264 130 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 TPBGLP0DKB5 382 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 KIR2DL1P43626 348 aaPredicted RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 LIG3P49916 1009 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 AQP5P55064 265 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 B4GALNT1Q00973 533 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 SETDB1Q15047 1291 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 FAM46CQ5VWP2 391 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 ERN2Q76MJ5 926 aaKnown RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 CPNE9Q8IYJ1 553 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 LINGO1Q96FE5 620 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 CNDP1Q96KN2 507 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 COQ10AQ96MF6 247 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 LRRC37BQ96QE4 947 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 RIOK2Q9BVS4 552 aaKnown RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 ILKAPQ9H0C8 392 aaPredicted RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 ITM2BQ9Y287 266 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 TRIOBPQ9H2D6 2365 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 WNT9AO14904 365 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 SLC25A14O95258 325 aaPredicted RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 IMPDH1P20839 514 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 CTHP32929 405 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 CAMK2GQ13555 558 aaPredicted RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 ACOX1Q15067 660 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 ZNF284Q2VY69 593 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 LACTB2Q53H82 288 aaPredicted RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 ARL13AQ5H913 290 aaPredicted RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 CFAP157Q5JU67 520 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 GPRC6AQ5T6X5 926 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 CYP2U1Q7Z449 544 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 CCNYL1Q8N7R7 359 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 RAB7BQ96AH8 199 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 TMEM237Q96Q45 408 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms