RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 USP7Q93009 1102 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 EID2BQ96D98 161 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 COX14Q96I36 57 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 OR2M4Q96R27 311 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 SLC25A18Q9H1K4 315 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 TAAR2Q9P1P5 351 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 RSPH14Q9UHP6 348 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 TRHDEQ9UKU6 1024 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 PLEKHM1Q9Y4G2 1056 aa17.38■□□□□ 0.37
FAM3A-216ENST00000449971 NVLO15381 856 aaKnown RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 ATP1A1P05023 1023 aaKnown RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 FGF1P05230 155 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 PTMAP06454 111 aaKnown RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 PTPN7P35236 360 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 EIF3EP60228 445 aaKnown RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 C14orf28Q4W4Y0 310 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 HENMT1Q5T8I9 393 aaKnown RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 KDELC1Q6UW63 502 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 SLC25A41Q8N5S1 370 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 UBL4BQ8N7F7 174 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 ZDHHC1Q8WTX9 485 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 SCARF2Q96GP6 870 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 FCRL5Q96RD9 977 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 SRPK1Q96SB4 655 aaKnown RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 FAM118BQ9BPY3 351 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 FERMT1Q9BQL6 677 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 SPATA16Q9BXB7 569 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 CDH19Q9H159 772 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 RAD18Q9NS91 495 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 LRIT1Q9P2V4 623 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 ZNHIT2Q9UHR6 403 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 CNOT6Q9ULM6 557 aaKnown RBP17.37■□□□□ 0.37
FAM3A-216ENST00000449971 SPO11Q9Y5K1 396 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 NBASA2RRP1 2371 aa17.37■□□□□ 0.37
FAM3A-216ENST00000449971 RELNP78509 3460 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 LOC285095A0A1B0GVY8 99 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 FADS2P1A8MWK0 482 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 TJP3O95049 919 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 FTCDO95954 541 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 GLB1P16278 677 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 HLTFQ14527 1009 aaKnown RBP eCLIP17.36■□□□□ 0.37
FAM3A-216ENST00000449971 SKIDA1Q1XH10 827 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 PYCR3Q53H96 274 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 CERCAMQ5T4B2 595 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 DARS2Q6PI48 645 aaKnown RBP17.36■□□□□ 0.37
FAM3A-216ENST00000449971 GALNT13Q8IUC8 556 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 CDKL3Q8IVW4 592 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-216ENST00000449971 GPR26Q8NDV2 337 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 IPMKQ8NFU5 416 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 OXNAD1Q96HP4 312 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-216ENST00000449971 PACSIN2Q9UNF0 486 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-216ENST00000449971 PRKAB1Q9Y478 270 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 OAS3Q9Y6K5 1087 aaKnown RBP17.36■□□□□ 0.37
FAM3A-216ENST00000449971 RNF215Q9Y6U7 377 aa17.36■□□□□ 0.37
FAM3A-216ENST00000449971 MIF4GDA9UHW6 222 aaKnown RBP17.35■□□□□ 0.37
FAM3A-216ENST00000449971 AURKAO14965 403 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 EPOP01588 193 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 RBP3P10745 1247 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 CCKBRP32239 447 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 ACTR1BP42025 376 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 CHRNA4P43681 627 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 MAZP56270 477 aaKnown RBP17.35■□□□□ 0.37
FAM3A-216ENST00000449971 GSDMDP57764 484 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 ACTR1AP61163 376 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 BIRC2Q13490 618 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 PEX6Q13608 980 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 UBAP2LQ14157 1087 aaKnown RBP17.35■□□□□ 0.37
FAM3A-216ENST00000449971 IGFBP7Q16270 282 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 SIRPB2Q5JXA9 342 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 MRGPRX2Q96LB1 330 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 BPIFA1Q9NP55 256 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 ARFGAP3Q9NP61 516 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 VPS18Q9P253 973 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 ACSL6Q9UKU0 697 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 ST14Q9Y5Y6 855 aa17.35■□□□□ 0.37
FAM3A-216ENST00000449971 ZFC3H1O60293 1989 aaKnown RBP17.35■□□□□ 0.37
FAM3A-216ENST00000449971 FLNCQ14315 2725 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 RHPN2P1A8MT19 583 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 KCNN4O15554 427 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 STK10O94804 968 aaKnown RBP17.34■□□□□ 0.37
FAM3A-216ENST00000449971 SLC25A14O95258 325 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-216ENST00000449971 ECEL1O95672 775 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 NTRK1P04629 796 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 BPIP17213 487 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 MPP3Q13368 585 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 MAP9Q49MG5 647 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 ZNF569Q5MCW4 686 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 ITPRIPL1Q6GPH6 555 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 CHST15Q7LFX5 561 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-216ENST00000449971 TRAM1L1Q8N609 369 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 CMKLR1Q99788 373 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 ZSCAN5AQ9BUG6 496 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 FSD1LQ9BXM9 530 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 GEMIN8Q9NWZ8 242 aaKnown RBP17.34■□□□□ 0.37
FAM3A-216ENST00000449971 APPL1Q9UKG1 709 aa17.34■□□□□ 0.37
FAM3A-216ENST00000449971 TRBV23OR9-2A0A075B6M9 112 aa17.33■□□□□ 0.36
FAM3A-216ENST00000449971 GOLGA6L9A6NEM1 432 aa17.33■□□□□ 0.36
FAM3A-216ENST00000449971 C9orf172C9J069 976 aa17.33■□□□□ 0.36
FAM3A-216ENST00000449971 DDX3YO15523 660 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms