RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TMC3Q7Z5M5 1100 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 ADGRG6Q86SQ4 1221 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 SPATA22Q8NHS9 363 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 PLEKHG4BQ96PX9 1271 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 GPR63Q9BZJ6 419 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 SLC25A51Q9H1U9 297 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 TRIM39Q9HCM9 518 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 SLC23A2Q9UGH3 650 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 PILRAQ9UKJ1 303 aa27.92■■■□□ 2.06
CBX4-202ENST00000448310 MTX2O75431 263 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 MT-CYBP00156 380 aaPredicted RBP27.91■■■□□ 2.06
CBX4-202ENST00000448310 TNNT1P13805 278 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 DCDC1P59894 354 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 UBE2IP63279 158 aaKnown RBP27.91■■■□□ 2.06
CBX4-202ENST00000448310 KCNC4Q03721 635 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 CDK18Q07002 472 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 TRAM1L1Q8N609 369 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 GLYATL1Q969I3 302 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 TEFMQ96QE5 360 aaKnown RBP27.91■■■□□ 2.06
CBX4-202ENST00000448310 ZSCAN5AQ9BUG6 496 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 LDHAL6BQ9BYZ2 381 aaPredicted RBP27.91■■■□□ 2.06
CBX4-202ENST00000448310 MAGEE1Q9HCI5 957 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 ZNHIT6Q9NWK9 470 aaKnown RBP27.91■■■□□ 2.06
CBX4-202ENST00000448310 HYOU1Q9Y4L1 999 aa27.91■■■□□ 2.06
CBX4-202ENST00000448310 OR5K4A6NMS3 321 aa27.9■■■□□ 2.06
CBX4-202ENST00000448310 PPP1R12AO14974 1030 aaPredicted RBP27.9■■■□□ 2.06
CBX4-202ENST00000448310 SFTPCP11686 197 aa27.9■■■□□ 2.06
CBX4-202ENST00000448310 NOP2P46087 812 aaKnown RBP27.9■■■□□ 2.06
CBX4-202ENST00000448310 INSCQ1MX18 579 aa27.9■■■□□ 2.06
CBX4-202ENST00000448310 TADA1Q96BN2 335 aa27.9■■■□□ 2.06
CBX4-202ENST00000448310 SPRY4Q9C004 299 aa27.9■■■□□ 2.06
CBX4-202ENST00000448310 DNAJC16Q9Y2G8 782 aa27.9■■■□□ 2.06
CBX4-202ENST00000448310 SPO11Q9Y5K1 396 aa27.9■■■□□ 2.06
CBX4-202ENST00000448310 AURKAO14965 403 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 MTA2O94776 668 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 BPIP17213 487 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 ARHGAP25P42331 645 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 CLCNKAP51800 687 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 GFERP55789 205 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 TRIM14Q14142 442 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 SEPT7Q16181 437 aaKnown RBP27.89■■■□□ 2.06
CBX4-202ENST00000448310 BORAQ6PGQ7 559 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 CEACAM20Q6UY09 585 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 TIPARPQ7Z3E1 657 aaKnown RBP27.89■■■□□ 2.06
CBX4-202ENST00000448310 VSIG1Q86XK7 387 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 UNC5BQ8IZJ1 945 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 NLGN4XQ8N0W4 816 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 NLGN4YQ8NFZ3 816 aaPredicted RBP27.89■■■□□ 2.06
CBX4-202ENST00000448310 RNF31Q96EP0 1072 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 GLOD4Q9HC38 313 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 ABHD10Q9NUJ1 306 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 GEMIN8Q9NWZ8 242 aaKnown RBP27.89■■■□□ 2.06
CBX4-202ENST00000448310 UBP1Q9NZI7 540 aa27.89■■■□□ 2.06
CBX4-202ENST00000448310 NFKBIL1Q9UBC1 381 aaPredicted RBP27.89■■■□□ 2.06
CBX4-202ENST00000448310 LOC101059948A0A1B0GTJ6 334 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 LILRA5A6NI73 299 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 CHUKO15111 745 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 PPFIA2O75334 1257 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 PMPCBO75439 489 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 TYRP1P17643 537 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 KHDC1Q4VXA5 237 aaKnown RBP27.88■■■□□ 2.05
CBX4-202ENST00000448310 MFSD7Q6UXD7 560 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 NHEJ1Q9H9Q4 299 aaPredicted RBP27.88■■■□□ 2.05
CBX4-202ENST00000448310 BPIFA1Q9NP55 256 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 FBXO8Q9NRD0 319 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 RAD18Q9NS91 495 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 OGFRQ9NZT2 677 aa27.88■■■□□ 2.05
CBX4-202ENST00000448310 ZNF891A8MT65 544 aaPredicted RBP27.87■■■□□ 2.05
CBX4-202ENST00000448310 ZFXP17010 805 aaPredicted RBP27.87■■■□□ 2.05
CBX4-202ENST00000448310 LLGL1Q15334 1064 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 ODF2Q5BJF6 829 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 PDPK2PQ6A1A2 396 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 LRRTM4Q86VH4 590 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 RHOT2Q8IXI1 618 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 CCDC42Q96M95 316 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 SLC25A18Q9H1K4 315 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 EPB41L1Q9H4G0 881 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 GPN2Q9H9Y4 310 aaPredicted RBP27.87■■■□□ 2.05
CBX4-202ENST00000448310 ZNF624Q9P2J8 865 aaPredicted RBP27.87■■■□□ 2.05
CBX4-202ENST00000448310 SAE1Q9UBE0 346 aaPredicted RBP27.87■■■□□ 2.05
CBX4-202ENST00000448310 TMPRSS11EQ9UL52 423 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 SLC30A1Q9Y6M5 507 aa27.87■■■□□ 2.05
CBX4-202ENST00000448310 MN1Q10571 1320 aaPredicted RBP27.87■■■□□ 2.05
CBX4-202ENST00000448310 A0A0A6YYK5 440 aaPredicted RBP27.86■■■□□ 2.05
CBX4-202ENST00000448310 PDZK1P1A8MUH7 402 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 TERTO14746 1132 aaKnown RBP27.86■■■□□ 2.05
CBX4-202ENST00000448310 NKX2-8O15522 239 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 CBFA2T2O43439 604 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 SUV39H1O43463 412 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 STK17BO94768 372 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 NDST3O95803 873 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 VIPP01282 170 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 ZNF7P17097 686 aaPredicted RBP27.86■■■□□ 2.05
CBX4-202ENST00000448310 PTPN3P26045 913 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 SLC19A1P41440 591 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 NOMO1Q15155 1222 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 TEX44Q53QW1 395 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 LRRC38Q5VT99 294 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 ATG14Q6ZNE5 492 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 TMEM26Q6ZUK4 368 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms