RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 RPS18P62269 152 aaKnown RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 UBE2IP63279 158 aaKnown RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 PDE1BQ01064 536 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 CDK18Q07002 472 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 KRT31Q15323 416 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 CRB2Q5IJ48 1285 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 VWA5B1Q5TIE3 1220 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 IZUMO3Q5VZ72 239 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 PWWP2BQ6NUJ5 590 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 FAM199XQ6PEV8 388 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 IGFL3Q6UXB1 125 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 SPNS3Q6ZMD2 512 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 ZNF517Q6ZMY9 492 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 MARK2Q7KZI7 788 aaKnown RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 ZNF765Q7L2R6 523 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 CHST15Q7LFX5 561 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 APTXQ7Z2E3 356 aaKnown RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 GDF7Q7Z4P5 450 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 TECPR1Q7Z6L1 1165 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 PYROXD2Q8N2H3 581 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 EXD1Q8NHP7 514 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 ADAMTS17Q8TE56 1095 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 FAM172AQ8WUF8 416 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 UBE2Q2Q8WVN8 375 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 CPA5Q8WXQ8 436 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 AP2M1Q96CW1 435 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 RNF31Q96EP0 1072 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 ZDHHC12Q96GR4 267 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 COX14Q96I36 57 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 LURAP1Q96LR2 239 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 TGM7Q96PF1 710 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 MCCC1Q96RQ3 725 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 RUFY1Q96T51 708 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 CINPQ9BW66 212 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 VPS16Q9H269 839 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 RMI1Q9H9A7 625 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 AKIRIN1Q9H9L7 192 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 AGPAT4Q9NRZ5 378 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 TAB2Q9NYJ8 693 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 EPHA6Q9UF33 1036 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 EGFL7Q9UHF1 273 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 ZNHIT2Q9UHR6 403 aa6.99□□□□□ -1.29
LRRC28-203ENST00000447360 COPG1Q9Y678 874 aaKnown RBP6.99□□□□□ -1.29
LRRC28-203ENST00000447360 ANKRD36A6QL64 1941 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 NPIPB15A6NHN6 443 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 EPHB6O15197 1021 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ZNF185O15231 689 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 CREB3O43889 395 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 TIAF1O95411 115 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 CPP00450 1065 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 F12P00748 615 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 RAB40ALP0C0E4 278 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 UCHL3P15374 230 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 TYRP1P17643 537 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 XRCC1P18887 633 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 MMP8P22894 467 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 KLK7P49862 253 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 CLCNKAP51800 687 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 VAV2P52735 878 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 NOMO3P69849 1222 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ART3Q13508 389 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 TUBB3Q13509 450 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 TESK1Q15569 626 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 CACHD1Q5VU97 1274 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 LYPLAL1Q5VWZ2 237 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 SASS6Q6UVJ0 657 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 TMEM26Q6ZUK4 368 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 USP45Q70EL2 814 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 TRIM74Q86UV6 250 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ANKMY2Q8IV38 441 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 RAVER1Q8IY67 606 aaKnown RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ARFGAP1Q8N6T3 406 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 FNIP1Q8TF40 1166 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 SLC41A2Q96JW4 573 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 NSMCE3Q96MG7 304 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 PLEKHG4BQ96PX9 1271 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 STK33Q9BYT3 514 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 SLC39A8Q9C0K1 460 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 RAB33BQ9H082 229 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ILKAPQ9H0C8 392 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ABCG8Q9H221 673 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ANO10Q9NW15 660 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 SEMA5BQ9P283 1151 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 LIMA1Q9UHB6 759 aaKnown RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 RARRES3Q9UL19 164 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 PPIL1Q9Y3C6 166 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 PCDHGC4Q9Y5F7 938 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 KLF2Q9Y5W3 355 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 FHOD1Q9Y613 1164 aa6.98□□□□□ -1.29
LRRC28-203ENST00000447360 DIDO1Q9BTC0 2240 aaKnown RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 ANKHD1Q8IWZ3 2542 aaKnown RBP6.98□□□□□ -1.29
LRRC28-203ENST00000447360 TNRC6AQ8NDV7 1962 aaKnown RBP6.97□□□□□ -1.29
LRRC28-203ENST00000447360 A6NL46 340 aa6.97□□□□□ -1.29
LRRC28-203ENST00000447360 GOLGA6L22H0YM25 854 aa6.97□□□□□ -1.29
LRRC28-203ENST00000447360 KIF1CO43896 1103 aaKnown RBP6.97□□□□□ -1.29
LRRC28-203ENST00000447360 KLHL41O60662 606 aa6.97□□□□□ -1.29
LRRC28-203ENST00000447360 SNX2O60749 519 aa6.97□□□□□ -1.29
LRRC28-203ENST00000447360 ZG16O60844 167 aa6.97□□□□□ -1.29
LRRC28-203ENST00000447360 CPNE3O75131 537 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms