RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 INSCQ1MX18 579 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 ZRANB3Q5FWF4 1079 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 ANKRD22Q5VYY1 191 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 ZNF534Q76KX8 674 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 DET1Q7L5Y6 550 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 FAM181AQ8N9Y4 354 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 PPHLN1Q8NEY8 458 aaKnown RBP11.78□□□□□ -0.52
RFC4-208ENST00000447345 ZNF398Q8TD17 642 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 GPBAR1Q8TDU6 330 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 GRK7Q8WTQ7 553 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 PATE1Q8WXA2 126 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 GLMNQ92990 594 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 TRIM44Q96DX7 344 aaPredicted RBP11.78□□□□□ -0.52
RFC4-208ENST00000447345 SCARF2Q96GP6 870 aaPredicted RBP11.78□□□□□ -0.52
RFC4-208ENST00000447345 TTC25Q96NG3 672 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 OSGEPL1Q9H4B0 414 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 TRIM39Q9HCM9 518 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 EVA1BQ9NVM1 165 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 NLE1Q9NVX2 485 aaPredicted RBP11.78□□□□□ -0.52
RFC4-208ENST00000447345 TAAR2Q9P1P5 351 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 ASIC3Q9UHC3 531 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 APPL1Q9UKG1 709 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 KLK13Q9UKR3 277 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 SLC30A1Q9Y6M5 507 aa11.78□□□□□ -0.52
RFC4-208ENST00000447345 KIF26BQ2KJY2 2108 aa11.77□□□□□ -0.52
RFC4-208ENST00000447345 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 HEATR9A2RTY3 570 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 FAM149AA5PLN7 773 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 MROH6A6NGR9 719 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 OR2AG2A6NM03 316 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 SNX2O60749 519 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 TMEM63AO94886 807 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 CDK14O94921 469 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 TPSB2P20231 275 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 MGAT1P26572 445 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 PBLDP30039 288 aaPredicted RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 RPIAP49247 311 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 CDKN1CP49918 316 aaPredicted RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 DUSP3P51452 185 aaPredicted RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 ARSDP51689 593 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 MAZP56270 477 aaKnown RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 TMEM115Q12893 351 aaPredicted RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 NFATC2Q13469 925 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 TPSAB1Q15661 275 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 SMAD1Q15797 465 aaKnown RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 PERM1Q5SV97 790 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 LVRNQ6Q4G3 990 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 LRRTM4Q86VH4 590 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 MARCH9Q86YJ5 346 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 SDR16C5Q8N3Y7 309 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 RASGEF1AQ8N9B8 481 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 DDHD1Q8NEL9 900 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 ZDHHC1Q8WTX9 485 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 STYXQ8WUJ0 223 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 ADAMTS14Q8WXS8 1223 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 CPT1BQ92523 772 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 CCDC97Q96F63 343 aaPredicted RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 ZNF778Q96MU6 729 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 SCNM1Q9BWG6 230 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 ZCCHC2Q9C0B9 1178 aaKnown RBP11.77□□□□□ -0.53
RFC4-208ENST00000447345 RMI1Q9H9A7 625 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 SMOXQ9NWM0 555 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 SYBUQ9NX95 663 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 FAM8A1Q9UBU6 413 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 SLC2A6Q9UGQ3 507 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 PADI4Q9UM07 663 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 DNAJC16Q9Y2G8 782 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 NEU2Q9Y3R4 380 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 TCAF1Q9Y4C2 921 aa11.77□□□□□ -0.53
RFC4-208ENST00000447345 TRBV23OR9-2A0A075B6M9 112 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 CCDC162PA2VCL2 907 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 CASC3O15234 703 aaKnown RBP11.76□□□□□ -0.53
RFC4-208ENST00000447345 VEGFDO43915 354 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 NOBOXO60393 691 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 DKK1O94907 266 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 TRIM16O95361 564 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 EML2O95834 649 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 MSH3P20585 1137 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 ADRA1DP25100 572 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 CTSCP53634 463 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 DR1Q01658 176 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 C2orf54Q08AI8 447 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 BIRC2Q13490 618 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 LRP8Q14114 963 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 SEPT7Q16181 437 aaKnown RBP11.76□□□□□ -0.53
RFC4-208ENST00000447345 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 C14orf28Q4W4Y0 310 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 TSTD2Q5T7W7 516 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 HES3Q5TGS1 186 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 TAS2R42Q7RTR8 314 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 SNX20Q7Z614 316 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 NXPE1Q8N323 547 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 BEND7Q8N7W2 519 aaPredicted RBP11.76□□□□□ -0.53
RFC4-208ENST00000447345 OR13J1Q8NGT2 312 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms