RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 GPD1LQ8N335 351 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 FUBP1Q96AE4 644 aaKnown RBP6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 FAM149B1Q96BN6 582 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 BTN2A3PQ96KV6 586 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 FCRL2Q96LA5 508 aaPredicted RBP6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 YIPF4Q9BSR8 244 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 STRA6Q9BX79 667 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 PLSCR2Q9NRY7 297 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 KCNS2Q9ULS6 477 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 SLC17A4Q9Y2C5 497 aa6.21□□□□□ -1.42
BRAFP1-201ENST00000445336 LMX1BO60663 402 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 FAM13AO94988 1023 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 APOEP02649 317 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 MMP11P24347 488 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 OTX2P32243 289 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 MTTPP55157 894 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 CASP9P55211 416 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 EIF4EBP2Q13542 120 aaPredicted RBP6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 ARHGAP17Q68EM7 881 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 RFWD3Q6PCD5 774 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 CAND1Q86VP6 1230 aaKnown RBP6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 CCAR2Q8N163 923 aaKnown RBP6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 ATP6V0D2Q8N8Y2 350 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 ZFPM2Q8WW38 1151 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 CASKIN2Q8WXE0 1202 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 ACCSQ96QU6 501 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 WDR54Q9H977 334 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 EIF3LQ9Y262 564 aaKnown RBP6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 LUC7L2Q9Y383 392 aaKnown RBP6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 MFHAS1Q9Y4C4 1052 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 RPN1P04843 607 aaKnown RBP6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 LOXL3P58215 753 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 MLF1P58340 268 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 PCDH1Q08174 1060 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 KLHL40Q2TBA0 621 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 WDR72Q3MJ13 1102 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 ZNF667Q5HYK9 610 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 KLHL35Q6PF15 583 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 BHLHA9Q7RTU4 235 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 RAVER1Q8IY67 606 aaKnown RBP6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 SYT14Q8NB59 555 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 SLC37A2Q8TED4 501 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 SNX29Q8TEQ0 813 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 FAM213AQ9BRX8 229 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 TEX101Q9BY14 249 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 IL25Q9H293 177 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 WDR26Q9H7D7 661 aa6.2□□□□□ -1.42
BRAFP1-201ENST00000445336 A0A087WWV3 80 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 ZNF233A6NK53 670 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 ELOA3DA6NLF2 546 aaPredicted RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 HSPB2A8KAH6 182 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 RNF223E7ERA6 249 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 POP4O95707 220 aaKnown RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CDH4P55283 916 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 RAD51Q06609 339 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 TRPC3Q13507 836 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 HSPB2Q16082 182 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 ELOA3BQ3SY89 546 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 L1TD1Q5T7N2 865 aaKnown RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 DPY19L3Q6ZPD9 716 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 TMEM126BQ8IUX1 230 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 ELOA3Q8NG57 546 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 PERPQ96FX8 193 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 OR2M4Q96R27 311 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 TRIM51Q9BSJ1 452 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 XYLT2Q9H1B5 865 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 PCMTD2Q9NV79 361 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 GPN3Q9UHW5 284 aaPredicted RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 NXT1Q9UKK6 140 aaKnown RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 PCDHGB3Q9Y5G1 929 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 OR5H15A6NDH6 313 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 SART1O43290 800 aaKnown RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 SNAP91O60641 907 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 SRGAP2O75044 1071 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 TIAF1O95411 115 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CLDN9O95484 217 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 RBP3P10745 1247 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CCDC130P13994 396 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 TACR1P25103 407 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 PTGS2P35354 604 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 SCNN1AP37088 669 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 PRPHP41219 470 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CAPZBP47756 277 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 DCDC1P59894 354 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CACHD1Q5VU97 1274 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 FAM199XQ6PEV8 388 aaPredicted RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 NEK10Q6ZWH5 1172 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 MCATQ8IVS2 390 aaKnown RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 KBTBD2Q8IY47 623 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 TEX29Q8N6K0 151 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CHST14Q8NCH0 376 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CATSPER1Q8NEC5 780 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 SEC16BQ96JE7 1060 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 FIZ1Q96SL8 496 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 OCSTAMPQ9BR26 566 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 LRRC2Q9BYS8 371 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 RMI1Q9H9A7 625 aa6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 CARS2Q9HA77 564 aaKnown RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 EML4Q9HC35 981 aaKnown RBP6.19□□□□□ -1.42
BRAFP1-201ENST00000445336 OGFRQ9NZT2 677 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms