RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PTRHD1Q6GMV3 140 aaKnown RBP13.56□□□□□ -0.24
RBM39-216ENST00000444878 HPS6Q86YV9 775 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 SP7Q8TDD2 431 aaPredicted RBP13.56□□□□□ -0.24
RBM39-216ENST00000444878 BBS2Q9BXC9 721 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 TDP1Q9NUW8 608 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 NDE1Q9NXR1 346 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 ANGPTL2Q9UKU9 493 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 PRPF19Q9UMS4 504 aaKnown RBP13.56□□□□□ -0.24
RBM39-216ENST00000444878 HS3ST2Q9Y278 367 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 DNAJC15Q9Y5T4 150 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
RBM39-216ENST00000444878 STX16-NPEPL1H3BU86 382 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 STX16O14662 325 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 SNX2O60749 519 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 FKBP6O75344 327 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 CLCN7P51798 805 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 NAA20P61599 178 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 TAF11Q15544 211 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 CDKN3Q16667 212 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 MYLK3Q32MK0 819 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 UGT3A2Q3SY77 523 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 FBXO48Q5FWF7 155 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 TMEM240Q5SV17 173 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 C22orf39Q6P5X5 142 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 TXNDC11Q6PKC3 985 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
RBM39-216ENST00000444878 ZSWIM9Q86XI8 627 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 GPSM1Q86YR5 675 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 RBFAQ8N0V3 343 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 SPPL3Q8TCT6 385 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 ISG20Q96AZ6 181 aaKnown RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 SERPINI1Q99574 410 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 CIPCQ9C0C6 399 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 IL26Q9NPH9 171 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 SEMA4BQ9NPR2 832 aaPredicted RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 MCM8Q9UJA3 840 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 POMPQ9Y244 141 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 DHRS7Q9Y394 339 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 GLYATL1P3A0A0U1RQE8 302 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 PSMD12O00232 456 aaPredicted RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 GAPDHSO14556 408 aaPredicted RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 KLK8O60259 260 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 MOSPD3O75425 235 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 RPS17P08708 135 aaKnown RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 HSPA1AP0DMV8 641 aaKnown RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 HSPA1BP0DMV9 641 aaKnown RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 ENO3P13929 434 aaPredicted RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 BPIP17213 487 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 GCKP35557 465 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 FASTKQ14296 549 aaKnown RBP13.55□□□□□ -0.24
RBM39-216ENST00000444878 MAPRE2Q15555 327 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 FAM219BQ5XKK7 198 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 GRAMD4Q6IC98 578 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 CYHR1Q6ZMK1 362 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 LRRC74BQ6ZQY2 392 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 RTL10Q7L3V2 364 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 GRIN3AQ8TCU5 1115 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 TWIST2Q8WVJ9 160 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 IRF7Q92985 503 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 SUV39H2Q9H5I1 410 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 CD274Q9NZQ7 290 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 GNPTGQ9UJJ9 305 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 TMCO1Q9UM00 188 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 LRRC42Q9Y546 428 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 WASF2Q9Y6W5 498 aa13.55□□□□□ -0.24
RBM39-216ENST00000444878 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 NPIPB15A6NHN6 443 aaPredicted RBP13.54□□□□□ -0.24
RBM39-216ENST00000444878 CRCPO75575 148 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 PABPC1P11940 636 aaKnown RBP13.54□□□□□ -0.24
RBM39-216ENST00000444878 RPS3P23396 243 aaKnown RBP eCLIP13.54□□□□□ -0.24
RBM39-216ENST00000444878 SPAM1P38567 509 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 AGTR2P50052 363 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 CCNHP51946 323 aaPredicted RBP13.54□□□□□ -0.24
RBM39-216ENST00000444878 FOXA1P55317 472 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 SLC5A9Q2M3M2 681 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 MUM1Q2TAK8 710 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 KANK2Q63ZY3 851 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
RBM39-216ENST00000444878 PSRC1Q6PGN9 363 aaPredicted RBP13.54□□□□□ -0.24
RBM39-216ENST00000444878 BNC2Q6ZN30 1099 aaPredicted RBP13.54□□□□□ -0.24
RBM39-216ENST00000444878 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 TSPAN33Q86UF1 283 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 PGAM4Q8N0Y7 254 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 JADE3Q92613 823 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 C3orf30Q96M34 536 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 LYSMD1Q96S90 227 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 CDRT15Q96T59 188 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 BOCQ9BWV1 1114 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 MRPL1Q9BYD6 325 aaKnown RBP13.54□□□□□ -0.24
RBM39-216ENST00000444878 ZDHHC6Q9H6R6 413 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 CCDC167Q9P0B6 97 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 PLXNB3Q9ULL4 1909 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 PIP5K1BO14986 540 aa13.54□□□□□ -0.24
RBM39-216ENST00000444878 CFLARO15519 480 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms