RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 MARCH4Q9P2E8 410 aaPredicted RBP4.16□□□□□ -1.74
AC003001.1-201ENST00000443247 ORC3Q9UBD5 711 aaPredicted RBP4.16□□□□□ -1.74
AC003001.1-201ENST00000443247 AASSQ9UDR5 926 aa4.16□□□□□ -1.74
AC003001.1-201ENST00000443247 POLG2Q9UHN1 485 aa4.16□□□□□ -1.74
AC003001.1-201ENST00000443247 CTAGE9A4FU28 777 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 CYSRT1A8MQ03 144 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 PRSS47A8MTI9 375 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 FAM72CH0Y354 149 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 MBD4O95243 580 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 CTAGE8P0CG41 777 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 PSMA4P25789 261 aaKnown RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 MAN1A1P33908 653 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 TIMP3P35625 211 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 AHRP35869 848 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 MMP14P50281 582 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 GALCP54803 685 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 RPL24P83731 157 aaKnown RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 TFAP4Q01664 338 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 RBM39Q14498 530 aaKnown RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 SOWAHCQ53LP3 525 aaPredicted RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 FAM72AQ5TYM5 149 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 PLA2G4FQ68DD2 849 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 LCN10Q6JVE6 187 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 FAM72DQ6L9T8 149 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 GLDNQ6ZMI3 551 aaPredicted RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 FAM72BQ86X60 149 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 EPHX4Q8IUS5 362 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 CTAGE4Q8IX94 777 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 RNF168Q8IYW5 571 aaPredicted RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 ADSSL1Q8N142 457 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 OR8K5Q8NH50 307 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 PHF21AQ96BD5 680 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 C1orf74Q96LT6 269 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 UPF2Q9HAU5 1272 aaKnown RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 DIAPH3Q9NSV4 1193 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 TCP11L1Q9NUJ3 509 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 MAP3K20Q9NYL2 800 aaKnown RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 KLHL9Q9P2J3 617 aa4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 UBA2Q9UBT2 640 aaPredicted RBP4.15□□□□□ -1.75
AC003001.1-201ENST00000443247 IGLV5-45A0A087WSX0 123 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 LIPT2A6NK58 231 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 EPB41L2O43491 1005 aaKnown RBP4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 SYNGR3O43761 229 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 RNASEH2AO75792 299 aaKnown RBP4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 IGHV4-39P01824 125 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 PRSS1P07477 247 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 CHMP24386 653 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 NR2F2P24468 414 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 GLIPR1P48060 266 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 SREBF2Q12772 1141 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 LRMPQ12912 555 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 GAGE5Q13069 117 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 GAGE6Q13070 117 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 KRT32Q14532 448 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 PLEKHM3Q6ZWE6 761 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 CCDC190Q86UF4 302 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 PM20D2Q8IYS1 436 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 ST6GAL2Q96JF0 529 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 ZNF354BQ96LW1 612 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 SEMA3CQ99985 751 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 EPB41L5Q9HCM4 733 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 OLA1Q9NTK5 396 aaKnown RBP4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 FAM118AQ9NWS6 357 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 MTMR10Q9NXD2 777 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 TCF19Q9Y242 345 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 NACADO15069 1562 aa4.14□□□□□ -1.75
AC003001.1-201ENST00000443247 MAP2K7O14733 419 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 DAB1O75553 588 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 CFC1BP0CG36 223 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 CFC1P0CG37 223 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 FGF5P12034 268 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 NR1D1P20393 614 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 ARCN1P48444 511 aaKnown RBP4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 ACVR2BQ13705 512 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 KRTAP27-1Q3LI81 207 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 GKAP1Q5VSY0 366 aaPredicted RBP4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 HAUS3Q68CZ6 603 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 Q75L30 129 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 FOXP4Q8IVH2 680 aaPredicted RBP4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 KLHDC8BQ8IXV7 354 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 RASGEF1CQ8N431 466 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 EMC1Q8N766 993 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 PAF1Q8N7H5 531 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 RBM15BQ8NDT2 890 aaKnown RBP4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 PPP4R1Q8TF05 950 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 FBXO17Q96EF6 278 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 ELMOD3Q96FG2 381 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 OXNAD1Q96HP4 312 aaPredicted RBP4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 MUC13Q9H3R2 512 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 TFB2MQ9H5Q4 396 aaKnown RBP4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 SMC4Q9NTJ3 1288 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 SETD4Q9NVD3 440 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 CORO1CQ9ULV4 474 aaPredicted RBP4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 GAB2Q9UQC2 676 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 MTMR6Q9Y217 621 aa4.13□□□□□ -1.75
AC003001.1-201ENST00000443247 SCAMP1O15126 338 aa4.12□□□□□ -1.75
AC003001.1-201ENST00000443247 PLPP2O43688 288 aa4.12□□□□□ -1.75
AC003001.1-201ENST00000443247 CTSVO60911 334 aa4.12□□□□□ -1.75
AC003001.1-201ENST00000443247 CSF2RAP15509 400 aa4.12□□□□□ -1.75
AC003001.1-201ENST00000443247 ZNF23P17027 643 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms