RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FOXN2P32314 431 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 B4GALNT1Q00973 533 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 SLC7A5Q01650 507 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 LAMB3Q13751 1172 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 MORF4L2Q15014 288 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 DEFB133Q30KQ1 61 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 PSAPL1Q6NUJ1 521 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 NLRP9Q7RTR0 991 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 SNX20Q7Z614 316 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 MMGT1Q8N4V1 131 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 RASGEF1AQ8N9B8 481 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 DEFB124Q8NES8 71 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 BAHD1Q8TBE0 780 aaPredicted RBP15.85■□□□□ 0.13
USP39-205ENST00000442708 SETD7Q8WTS6 366 aaKnown RBP15.85■□□□□ 0.13
USP39-205ENST00000442708 WDR83Q9BRX9 315 aaKnown RBP15.85■□□□□ 0.13
USP39-205ENST00000442708 SPASTQ9UBP0 616 aa15.85■□□□□ 0.13
USP39-205ENST00000442708 ARHGEF17Q96PE2 2063 aaPredicted RBP15.85■□□□□ 0.13
USP39-205ENST00000442708 DCDC2BA2VCK2 349 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 SDR42E2A6NKP2 422 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 CHUKO15111 745 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 YY2O15391 372 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 NUAK1O60285 661 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 ZNF500O60304 480 aaPredicted RBP15.84■□□□□ 0.13
USP39-205ENST00000442708 MYF5P13349 255 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 CTSEP14091 401 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 DEKP35659 375 aaKnown RBP15.84■□□□□ 0.13
USP39-205ENST00000442708 GRK6P43250 576 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 BLKP51451 505 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 TMEM115Q12893 351 aaPredicted RBP15.84■□□□□ 0.13
USP39-205ENST00000442708 SEMA3AQ14563 771 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 SUZ12Q15022 739 aaKnown RBP15.84■□□□□ 0.13
USP39-205ENST00000442708 ZRANB3Q5FWF4 1079 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 LDLRAP1Q5SW96 308 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 ZNF547Q8IVP9 402 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 IGDCC3Q8IVU1 814 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 SFTPA2Q8IWL1 248 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 NXPE1Q8N323 547 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 LRRN4CLQ8ND94 238 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 GDAP1Q8TB36 358 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 GPBAR1Q8TDU6 330 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 FCRL3Q96P31 734 aaPredicted RBP15.84■□□□□ 0.13
USP39-205ENST00000442708 OR2M4Q96R27 311 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 RTKNQ9BST9 563 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 BOCQ9BWV1 1114 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 MRM3Q9HC36 420 aaKnown RBP15.84■□□□□ 0.13
USP39-205ENST00000442708 SLC23A2Q9UGH3 650 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 ZNHIT2Q9UHR6 403 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 ANAPC5Q9UJX4 755 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 GPSM3Q9Y4H4 160 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 CSNK1G3Q9Y6M4 447 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 SLC30A1Q9Y6M5 507 aa15.84■□□□□ 0.13
USP39-205ENST00000442708 ESPNB1AK53 854 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 BHMG1C9JSJ3 638 aaPredicted RBP15.83■□□□□ 0.12
USP39-205ENST00000442708 LMO7DNF2Z398 122 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 SIGLEC6O43699 453 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 SGTAO43765 313 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 VEGFDO43915 354 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 CDK14O94921 469 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 ITGALP20701 1170 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 AK4P27144 223 aaPredicted RBP15.83■□□□□ 0.12
USP39-205ENST00000442708 CTSCP53634 463 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 CTBSQ01459 385 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 CACNG1Q06432 222 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 DHX9Q08211 1270 aaKnown RBP15.83■□□□□ 0.12
USP39-205ENST00000442708 SMAD1Q15797 465 aaKnown RBP15.83■□□□□ 0.12
USP39-205ENST00000442708 DBN1Q16643 649 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 GPR33Q49SQ1 333 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 CASC4Q6P4E1 433 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 CRTC3Q6UUV7 619 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 TAS2R42Q7RTR8 314 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 SERPINA9Q86WD7 417 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 OR4C6Q8NH72 309 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 RHBDD1Q8TEB9 315 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 PEX13Q92968 403 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 CARD6Q9BX69 1037 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 PLAC1Q9HBJ0 212 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 TRNAU1APQ9NX07 287 aaKnown RBP15.83■□□□□ 0.12
USP39-205ENST00000442708 NLGN3Q9NZ94 848 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 MARCH4Q9P2E8 410 aaPredicted RBP15.83■□□□□ 0.12
USP39-205ENST00000442708 CRLS1Q9UJA2 301 aa15.83■□□□□ 0.12
USP39-205ENST00000442708 IGLV3-16A0A075B6K0 115 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 LY6G6EA0A0G2JKS1 128 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 ZCWPW2A0A1B0GU75 182 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 CTAGE15A4D2H0 777 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 GRID2O43424 1007 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 CTAGE8P0CG41 777 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 CSRP1P21291 193 aaKnown RBP15.82■□□□□ 0.12
USP39-205ENST00000442708 ACRV1P26436 265 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 ARCN1P48444 511 aaKnown RBP15.82■□□□□ 0.12
USP39-205ENST00000442708 ELOCQ15369 112 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 PROX2Q3B8N5 592 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 PLA2G4EQ3MJ16 856 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 BBS9Q3SYG4 887 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 ANKRD20A4Q4UJ75 823 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 HP1BP3Q5SSJ5 553 aaPredicted RBP15.82■□□□□ 0.12
USP39-205ENST00000442708 C8orf74Q6P047 294 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 AFTPHQ6ULP2 937 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 DET1Q7L5Y6 550 aa15.82■□□□□ 0.12
USP39-205ENST00000442708 CHST15Q7LFX5 561 aaPredicted RBP15.82■□□□□ 0.12
USP39-205ENST00000442708 ERMP1Q7Z2K6 904 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms