RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SBK3P0C264 359 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SLURP2P0DP57 97 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SP100P23497 879 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PTGER3P43115 390 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CEBPZQ03701 1054 aaKnown RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GAD2Q05329 585 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PDCLQ13371 301 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 NONOQ15233 471 aaKnown RBP eCLIP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TRIM60Q495X7 471 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 C9orf152Q5JTZ5 239 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 AFMIDQ63HM1 303 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 LYPD4Q6UWN0 246 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ADGRA1Q86SQ6 560 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KBTBD6Q86V97 674 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CAMK1DQ8IU85 385 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PLXDC1Q8IUK5 500 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CDKL3Q8IVW4 592 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TTLL6Q8N841 843 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 REPS2Q8NFH8 660 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 IRGQQ8WZA9 623 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ALG14Q96F25 216 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FCRL4Q96PJ5 515 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GCNAQ96QF7 691 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CYTH2Q99418 400 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 BBS2Q9BXC9 721 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 HEMGNQ9BXL5 484 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SLC26A1Q9H2B4 701 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TBC1D13Q9NVG8 400 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 RLIMQ9NVW2 624 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CYP39A1Q9NYL5 469 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 UXTQ9UBK9 157 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SPASTQ9UBP0 616 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CNOT7Q9UIV1 285 aaKnown RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CHMP2BQ9UQN3 213 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MTMR6Q9Y217 621 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SNX14Q9Y5W7 946 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 AFDNP55196 1824 aaKnown RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TMEM265A0A087WTH1 108 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 HMX2A2RU54 273 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CLDN3O15551 220 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CCNT1O60563 726 aaKnown RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ITGA10O75578 1167 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CCNDBP1O95273 360 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 AK1P00568 194 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CYP1A1P04798 512 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ITGB3P05106 788 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KRT4P19013 534 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CYP2A7P20853 494 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SAT1P21673 171 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PTPN3P26045 913 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 RRM2P31350 389 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 BMPR1AP36894 532 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ARSEP51690 589 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 NME5P56597 212 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CYP4F2P78329 520 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PDE1BQ01064 536 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TNFRSF17Q02223 184 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KLC1Q07866 573 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 LGALS3BPQ08380 585 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CAMK1Q14012 370 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ZNF268Q14587 947 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GRM4Q14833 912 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 LAPTM4AQ15012 233 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 STILQ15468 1287 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CCDC153Q494R4 210 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GPAT3Q53EU6 434 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FCRL6Q6DN72 434 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 BLOC1S2Q6QNY1 142 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TOM1L2Q6ZVM7 507 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FJX1Q86VR8 437 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 LRRC6Q86X45 466 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MAPKAPK5Q8IW41 473 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PYROXD2Q8N2H3 581 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GALNT4Q8N4A0 578 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 WDTC1Q8N5D0 677 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FRMD1Q8N878 549 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 NFKBIDQ8NI38 313 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PSMA8Q8TAA3 256 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 METTL6Q8TCB7 284 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 AGAP11Q8TF27 550 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SCFD1Q8WVM8 642 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 AZIN2Q96A70 460 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FAM71F1Q96KD3 344 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MEGF10Q96KG7 1140 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TMEM68Q96MH6 324 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FUZQ9BT04 418 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TDRD1Q9BXT4 1180 aaKnown RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MUC13Q9H3R2 512 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 RMND1Q9NWS8 449 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PAQR5Q9NXK6 330 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 LARSQ9P2J5 1176 aaKnown RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ANKMY1Q9P2S6 941 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 XPR1Q9UBH6 696 aa5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MRPS2Q9Y399 296 aaKnown RBP5.86□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 WDR17Q8IZU2 1322 aa5.85□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PCDH11XQ9BZA7 1347 aa5.85□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PCDH11YQ9BZA8 1340 aa5.85□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PARP4Q9UKK3 1724 aaKnown RBP5.85□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MYH15Q9Y2K3 1946 aa5.85□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ZC3H12DA2A288 527 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms