RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 SCAMP4Q969E2 229 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 KIAA1143Q96AT1 154 aaPredicted RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 NSMCE3Q96MG7 304 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 CATSPER2Q96P56 530 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 NUDT22Q9BRQ3 303 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 ZPBPQ9BS86 351 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 HERPUD2Q9BSE4 406 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 MLPHQ9BV36 600 aaPredicted RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 RIOK2Q9BVS4 552 aaKnown RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 TDRD1Q9BXT4 1180 aaKnown RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 SEMA4CQ9C0C4 833 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 EPB41L1Q9H4G0 881 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 FAM83DQ9H4H8 585 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 PCDH9Q9HC56 1237 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 SARS2Q9NP81 518 aaKnown RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 RAD18Q9NS91 495 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 ZNHIT6Q9NWK9 470 aaKnown RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 FOXJ2Q9P0K8 574 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 CAPN11Q9UMQ6 739 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 CHKBQ9Y259 395 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 COL27A1Q8IZC6 1860 aaPredicted RBP6.74□□□□□ -1.33
ERCC8-203ENST00000439176 ZNF462Q96JM2 2506 aa6.74□□□□□ -1.33
ERCC8-203ENST00000439176 TRBV23OR9-2A0A075B6M9 112 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 KIR2DS5A0A0G2JLQ3 304 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 A0A0G2JNG1 304 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 A6NJY4 79 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 EFCAB7A8K855 629 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ZNF891A8MT65 544 aaPredicted RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ANKRD66B4E2M5 251 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 KIR2DS3K7RE56 304 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 SNX2O60749 519 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 MTA2O94776 668 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 PROSCO94903 275 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 WISP1O95388 367 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 CLDN7O95471 211 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 SOD1P00441 154 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 CD48P09326 243 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 FGF3P11487 239 aaPredicted RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ZFXP17010 805 aaPredicted RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 MPSTP25325 297 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 SPINT3P49223 89 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 CSRP3P50461 194 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 KIR2DS5Q14953 304 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 IQCB1Q15051 598 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 LINC00303Q3SY05 128 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 SNAP47Q5SQN1 464 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 HGSNATQ68CP4 663 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 NCBP2-AS2Q69YL0 99 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 BORAQ6PGQ7 559 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 IYDQ6PHW0 289 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 CEACAM20Q6UY09 585 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ZNF574Q6ZN55 896 aaPredicted RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 BZW1Q7L1Q6 419 aaKnown RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 TMPRSS9Q7Z410 1059 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 KDELC2Q7Z4H8 507 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 TRIM74Q86UV6 250 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 PLXDC1Q8IUK5 500 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 CACNA2D3Q8IZS8 1091 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 SLC37A2Q8TED4 501 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 PATE1Q8WXA2 126 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 NCSTNQ92542 709 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 NKD1Q969G9 470 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 HDAC11Q96DB2 347 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 COX14Q96I36 57 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 LYSMD1Q96S90 227 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ZSCAN5AQ9BUG6 496 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 CARD9Q9H257 536 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ADNPQ9H2P0 1102 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 TRIT1Q9H3H1 467 aaKnown RBP6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 STARD5Q9NSY2 213 aa6.73□□□□□ -1.33
ERCC8-203ENST00000439176 ATMQ13315 3056 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 SYCE3A1L190 88 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 LRRD1A4D1F6 860 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 A8MU76 341 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 PPP1R12AO14974 1030 aaPredicted RBP6.72□□□□□ -1.33
ERCC8-203ENST00000439176 POLR1CO15160 346 aaPredicted RBP6.72□□□□□ -1.33
ERCC8-203ENST00000439176 GRID2O43424 1007 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 AKR1B10O60218 316 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 NUAK1O60285 661 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 RAD1O60671 282 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 SLC25A14O95258 325 aaPredicted RBP6.72□□□□□ -1.33
ERCC8-203ENST00000439176 MAP3K6O95382 1288 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 JCHAINP01591 159 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 ATP1A1P05023 1023 aaKnown RBP6.72□□□□□ -1.33
ERCC8-203ENST00000439176 HLA-DQB2P05538 268 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 THBS1P07996 1170 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 FAM87AP0C7U9 286 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 ACP5P13686 325 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 F3P13726 295 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 VCLP18206 1134 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 PTMSP20962 102 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 UGT1A3P35503 534 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 CD86P42081 329 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 ARHGAP25P42331 645 aa6.72□□□□□ -1.33
ERCC8-203ENST00000439176 MAPK9P45984 424 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms