RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 SLC5A2P31639 672 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 MS4A2Q01362 244 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 ACVR1Q04771 509 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 CYTH1Q15438 398 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 ZNF678Q5SXM1 525 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 FAM109BQ6ICB4 259 aaPredicted RBP13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 HTR3DQ70Z44 454 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 AFAP1L2Q8N4X5 818 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 PCDH20Q8N6Y1 951 aaKnown RBP13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 HMGCLL1Q8TB92 370 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 GRIN3AQ8TCU5 1115 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 DDI1Q8WTU0 396 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 SNRNP27Q8WVK2 155 aaKnown RBP13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 VPS28Q9UK41 221 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 TRAF6Q9Y4K3 522 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 GBF1Q92538 1859 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 A0A0U1RQS6 177 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PEX1O43933 1283 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 NDST3O95803 873 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 IMPDH1P20839 514 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 CSKP41240 450 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 UBE3AQ05086 875 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 RFTN1Q14699 578 aaPredicted RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 HERC3Q15034 1050 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 OR4D1Q15615 310 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PFKFB4Q16877 469 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 GEN1Q17RS7 908 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 DUS1LQ6P1R4 473 aaKnown RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 ZNF783Q6ZMS7 281 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 AMIGO2Q86SJ2 522 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PTGR2Q8N8N7 351 aaPredicted RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 BHLHE22Q8NFJ8 381 aaPredicted RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 OR4K2Q8NGD2 314 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 OR9I1Q8NGQ6 314 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 CDKN2AIPNLQ96HQ2 116 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 FAM210AQ96ND0 272 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 BTBD9Q96Q07 612 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 TRIB3Q96RU7 358 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 FEM1AQ9BSK4 669 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 FBRSL1Q9HCM7 1045 aaKnown RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PLK2Q9NYY3 685 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 CCL26Q9Y258 94 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PTGDR2Q9Y5Y4 395 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 ANKRD36A6QL64 1941 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 C5orf67F2Z3F1 127 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 ZSCAN9O15535 394 aaPredicted RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 DENRO43583 198 aaKnown RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 CD160O95971 181 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 STC1P52823 247 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 XIAPP98170 497 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 FASTKQ14296 549 aaKnown RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PTPRRQ15256 657 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 AGKQ53H12 422 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 CYHR1Q6ZMK1 362 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 GLT6D1Q7Z4J2 308 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 TMIGD2Q96BF3 282 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 NSUN5Q96P11 429 aaKnown RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 EPB41L1Q9H4G0 881 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 ADA2Q9NZK5 511 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 DNMT3BQ9UBC3 853 aaKnown RBP13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 PSMD13Q9UNM6 376 aa13.79□□□□□ -0.2
PTCHD3-201ENST00000438700 GPC4O75487 556 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 EPOP01588 193 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 CA3P07451 260 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 CR2P20023 1033 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 FMO4P31512 558 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 CDKN1CP49918 316 aaPredicted RBP13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 HERVK_113P63132 956 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 SH3BP2P78314 561 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 PTK2BQ14289 1009 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 TEAD2Q15562 447 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 UNC50Q53HI1 259 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 C9orf50Q5SZB4 431 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 RIN3Q8TB24 985 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 STON2Q8WXE9 905 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 FAR2Q96K12 515 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 C3orf30Q96M34 536 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 ERVK-6Q9BXR3 956 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 MRPL1Q9BYD6 325 aaKnown RBP13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 ZNF510Q9Y2H8 683 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 PCDHGC4Q9Y5F7 938 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 OR51B4Q9Y5P0 310 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 NOTCH4Q99466 2003 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 PSMD12O00232 456 aaPredicted RBP13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 INSIG1O15503 277 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 CLASP2O75122 1294 aaKnown RBP13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 RHOP08100 348 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 EPHA5P54756 1037 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 EMP3P54852 163 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 ZNF697Q5TEC3 545 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 CHSY3Q70JA7 882 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 CPXM2Q8N436 756 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 LPCAT1Q8NF37 534 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 MDGA1Q8NFP4 955 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 PKP2Q99959 881 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 GIMAP2Q9UG22 337 aa13.78□□□□□ -0.2
PTCHD3-201ENST00000438700 VPS51Q9UID3 782 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms