RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 KRIT1O00522 736 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ALOX15BO15296 676 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 KCNN4O15554 427 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 EPN2O95208 641 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 POP4O95707 220 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 MT-CO1P00395 513 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 IL1BP01584 269 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 JCHAINP01591 159 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PF4P02776 101 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 MT-ND3P03897 115 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 DNTTP04053 509 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PRNPP04156 253 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CCNB1P14635 433 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ITIH2P19823 946 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ENDOUP21128 410 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CA4P22748 312 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 XPAP23025 273 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 RBL1P28749 1068 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CHRNA3P32297 505 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ETV1P50549 477 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 SCNN1BP51168 640 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 DR1Q01658 176 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CKAP4Q07065 602 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 MTAPQ13126 283 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 FZD5Q13467 585 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PIN1Q13526 163 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CAMK2GQ13555 558 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 SNX1Q13596 522 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 BYSLQ13895 437 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PRPSAP1Q14558 356 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ELAVL3Q14576 367 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 GRM3Q14832 879 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CRYMQ14894 314 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CYTH1Q15438 398 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CCNG2Q16589 344 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ZNF776Q68DI1 518 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ITPRIPL1Q6GPH6 555 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ANO7Q6IWH7 933 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 POMZP3Q6PJE2 187 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CORO6Q6QEF8 472 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 GSTA5Q7RTV2 222 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ERMP1Q7Z2K6 904 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 SLC9B2Q86UD5 537 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 GALNT13Q8IUC8 556 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 C1orf210Q8IVY1 113 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PLD6Q8N2A8 252 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 STK40Q8N2I9 435 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 RASGEF1CQ8N431 466 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 CAMKK1Q8N5S9 505 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 TMEM105Q8N8V8 129 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 DTWD2Q8NBA8 298 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 OR2AP1Q8NGE2 309 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 NETO1Q8TDF5 533 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ACTRT1Q8TDG2 376 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 COG1Q8WTW3 980 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 HMGB4Q8WW32 186 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 C1orf54Q8WWF1 131 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 HTR3CQ8WXA8 447 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PRCCQ92733 491 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 FATE1Q969F0 183 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 MAGOHBQ96A72 148 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 SIPA1Q96FS4 1042 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PPP1R16AQ96I34 528 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 MS4A14Q96JA4 679 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 OLFM3Q96PB7 478 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 QKIQ96PU8 341 aaKnown RBP eCLIP6.19□□□□□ -1.423e-7■■■■□ 24.7
ECHDC1-208ENST00000436638 LGMNQ99538 433 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 FAM118BQ9BPY3 351 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 HEPHQ9BQS7 1158 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 RSRP1Q9BUV0 290 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 POLR1EQ9GZS1 481 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 STMN4Q9H169 189 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 ZDHHC6Q9H6R6 413 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 NT5MQ9NPB1 228 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PRSS16Q9NQE7 514 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 PDP2Q9P2J9 529 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 HECAQ9UBI9 543 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 IL36AQ9UHA7 158 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 AMACRQ9UHK6 382 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 TRHDEQ9UKU6 1024 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 RIMKLBQ9ULI2 386 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 SCML1Q9UN30 329 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 NCKAP1Q9Y2A7 1128 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 TMED5Q9Y3A6 229 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 KIAA1549LQ6ZVL6 1849 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 COL4A3Q01955 1670 aa6.19□□□□□ -1.42
ECHDC1-208ENST00000436638 DOCK4Q8N1I0 1966 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 A0A1W2PQ67 120 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 TCRBV7S2A1N4TA0A589 114 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 BCLAF3A2AJT9 711 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 FAM221AA4D161 298 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 ANTXRLA6NF34 631 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 F5H423 210 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 KCNK1O00180 336 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 RNF103O00237 685 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 KPNA3O00505 521 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 ZNF185O15231 689 aa6.18□□□□□ -1.42
ECHDC1-208ENST00000436638 INSIG1O15503 277 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms