RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 FOXM1Q08050 763 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 ILF3Q12906 894 aaKnown RBP eCLIP10.32□□□□□ -0.763e-7■■□□□ 12.3
CPNE1-214ENST00000435747 PIGHQ14442 188 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 RFTN1Q14699 578 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 BOLA3Q53S33 107 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 VWA2Q5GFL6 755 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 BRAT1Q6PJG6 821 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 SRLQ86TD4 932 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 ZNF354CQ86Y25 554 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 CPNE8Q86YQ8 564 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 CBARPQ8N350 705 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 PGBD5Q8N414 524 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 LZTR1Q8N653 840 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 FDCSPQ8NFU4 85 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 UBE2Q2Q8WVN8 375 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 TEKT4Q8WW24 435 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 PATE1Q8WXA2 126 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 IQCDQ96DY2 449 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 BTBD6Q96KE9 485 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 ZNF599Q96NL3 588 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 NCAPGQ9BPX3 1015 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 NUDT9Q9BW91 350 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 SUDS3Q9H7L9 328 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 PCDH18Q9HCL0 1135 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 IFNKQ9P0W0 207 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 MYO1AQ9UBC5 1043 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 PRRC2AP48634 2157 aaKnown RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 PIKFYVEQ9Y2I7 2098 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 A0A1B0GUH1 482 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 CFAP69A5D8W1 941 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 C21orf140B9A014 251 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 HTRA2O43464 458 aaPredicted RBP10.31□□□□□ -0.76
CPNE1-214ENST00000435747 PALMO75781 387 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 CEACAM4O75871 244 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 KIAA0754O94854 1291 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 DESP17661 470 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 AMPD1P23109 780 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 KRTAP10-9P60411 292 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 ELP6Q0PNE2 266 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 IHHQ14623 411 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 TDRD12Q587J7 1177 aaKnown RBP10.31□□□□□ -0.76
CPNE1-214ENST00000435747 ALKBH5Q6P6C2 394 aaKnown RBP10.31□□□□□ -0.76
CPNE1-214ENST00000435747 FJX1Q86VR8 437 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 NRROSQ86YC3 692 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 ZNF295-AS1Q8N0V1 137 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 CT55Q8WUE5 264 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 DNAJC7Q99615 494 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 NUP85Q9BW27 656 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 XPO4Q9C0E2 1151 aaKnown RBP10.31□□□□□ -0.76
CPNE1-214ENST00000435747 ILKAPQ9H0C8 392 aaPredicted RBP10.31□□□□□ -0.76
CPNE1-214ENST00000435747 ZWILCHQ9H900 591 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 AGPAT4Q9NRZ5 378 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.31□□□□□ -0.76
CPNE1-214ENST00000435747 GPR83Q9NYM4 423 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 KLHL3Q9UH77 587 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 LNPEPQ9UIQ6 1025 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 PADI1Q9ULC6 663 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 B3GNT3Q9Y2A9 372 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 ATP8A1Q9Y2Q0 1164 aa10.31□□□□□ -0.76
CPNE1-214ENST00000435747 LUC7L2Q9Y383 392 aaKnown RBP10.31□□□□□ -0.76
CPNE1-214ENST00000435747 PRSS38A1L453 326 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 TTC24A2A3L6 582 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 H3BRJ5 948 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 DFFAO00273 331 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 NDUFA10O95299 355 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 CD48P09326 243 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 XPAP23025 273 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 HTR1EP28566 365 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 LIG3P49916 1009 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 AP1S1P61966 158 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 SRSF11Q05519 484 aaKnown RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 PEX6Q13608 980 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 LBRQ14739 615 aaKnown RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 TMCO4Q5TGY1 634 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 SLC30A9Q6PML9 568 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 WDR74Q6RFH5 385 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 LIPIQ6XZB0 460 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 ZNF517Q6ZMY9 492 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 DPPA4Q7L190 304 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 TAOK1Q7L7X3 1001 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 ZNF761Q86XN6 746 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 RASGRP3Q8IV61 690 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 NAGSQ8N159 534 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 PELI3Q8N2H9 469 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 PLA2G15Q8NCC3 412 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 CPLX3Q8WVH0 158 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 SLC38A3Q99624 504 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 MGME1Q9BQP7 344 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 ATP13A3Q9H7F0 1226 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 CARS2Q9HA77 564 aaKnown RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 SP110Q9HB58 689 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 IP6K2Q9UHH9 426 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 ANAPC7Q9UJX3 599 aa10.3□□□□□ -0.76
CPNE1-214ENST00000435747 MN1Q10571 1320 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-214ENST00000435747 SSU72P8A0A1W2PR75 194 aa10.29□□□□□ -0.76
CPNE1-214ENST00000435747 TMEM200CA6NKL6 621 aa10.29□□□□□ -0.76
CPNE1-214ENST00000435747 A6NL46 340 aa10.29□□□□□ -0.76
CPNE1-214ENST00000435747 F5H423 210 aaPredicted RBP10.29□□□□□ -0.76
CPNE1-214ENST00000435747 ZNF185O15231 689 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms