RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 OSBPL9Q96SU4 736 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 DUSP23Q9BVJ7 150 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 OR2AG1Q9H205 316 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 SYNDIG1Q9H7V2 258 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 IL26Q9NPH9 171 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 IL17CQ9P0M4 197 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 ATXN10Q9UBB4 475 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 CNOT6Q9ULM6 557 aaKnown RBP5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 PADI4Q9UM07 663 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 GPR34Q9UPC5 381 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 PCYT1BQ9Y5K3 369 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 OAS3Q9Y6K5 1087 aaKnown RBP5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 CSNK1G3Q9Y6M4 447 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 SCN8AQ9UQD0 1980 aa5.72□□□□□ -1.49
HMGB3P24-201ENST00000433260 COL5A1P20908 1838 aaPredicted RBP5.71□□□□□ -1.49
HMGB3P24-201ENST00000433260 RIF1Q5UIP0 2472 aaKnown RBP5.71□□□□□ -1.49
HMGB3P24-201ENST00000433260 MYO15AQ9UKN7 3530 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 LY6G6EA0A0G2JKS1 128 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 GLYATL1P3A0A0U1RQE8 302 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 RGSL1A5PLK6 1076 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 C1QTNF9BB2RNN3 333 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 LMO7DNF2Z398 122 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TPP1O14773 563 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPR39O43194 453 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 GRID2O43424 1007 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 SNX2O60749 519 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 DNAJC6O75061 913 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 RFPL3O75679 317 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CDK14O94921 469 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRIM16O95361 564 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CRTAMO95727 393 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 KRT14P02533 472 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 FGF1P05230 155 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PYGLP06737 847 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 C1QTNF9P0C862 333 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CKMT1AP12532 417 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ACP5P13686 325 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF8P17098 575 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 LPOP22079 712 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ACP1P24666 158 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 MSNP26038 577 aaKnown RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 SPAM1P38567 509 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ACTR1BP42025 376 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PPM1FP49593 454 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ACADVLP49748 655 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 VPS41P49754 854 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 DUSP3P51452 185 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ACTR1AP61163 376 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 BASP1P80723 227 aaKnown RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 POU4F2Q12837 409 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TMEM115Q12893 351 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ILF3Q12906 894 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 MSLNQ13421 630 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 BIRC2Q13490 618 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 SEPT6Q14141 434 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 POU6F1Q14863 301 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 NR0B2Q15466 257 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TAF1AQ15573 450 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 OCLNQ16625 522 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 P3H1Q32P28 736 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ATP13A5Q4VNC0 1218 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCDC38Q502W7 563 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PYCR3Q53H96 274 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PERM1Q5SV97 790 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CERCAMQ5T4B2 595 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 HENMT1Q5T8I9 393 aaKnown RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 KCTD11Q693B1 232 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZCCHC8Q6NZY4 707 aaKnown RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TTC27Q6P3X3 843 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 GUSBP11Q6P575 273 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CRTC3Q6UUV7 619 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PPP1R21Q6ZMI0 780 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 RAB44Q7Z6P3 723 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ADGRG6Q86SQ4 1221 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 NRROSQ86YC3 692 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC35F3Q8IY50 421 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 RAVER1Q8IY67 606 aaKnown RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TTC30BQ8N4P2 665 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PRELID2Q8N945 189 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 Q8N9G6 341 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR13C4Q8NGS5 318 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 IFI44Q8TCB0 444 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 MAPK15Q8TD08 544 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF398Q8TD17 642 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 BRSK1Q8TDC3 778 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPBAR1Q8TDU6 330 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PATE1Q8WXA2 126 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 GLYATL1Q969I3 302 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 MAGOHBQ96A72 148 aaKnown RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 COL26A1Q96A83 441 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 COX14Q96I36 57 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CAPZA3Q96KX2 299 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TTC25Q96NG3 672 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZSCAN5AQ9BUG6 496 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 BOCQ9BWV1 1114 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 GSDMCQ9BYG8 508 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 FRMD8Q9BZ67 464 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 FRMD8P1Q9BZ68 369 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRABDQ9H4I3 376 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms