RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 HRH2P25021 359 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 HOXC8P31273 242 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 MMP13P45452 471 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 HMGA2P52926 109 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 NANOS3P60323 173 aaKnown RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMF1P82094 1093 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE1Q13065 139 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE4Q13068 117 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 PRPF4BQ13523 1007 aaKnown RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 SRSF7Q16629 238 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 AMZ1Q400G9 498 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 KRTCAP3Q53RY4 240 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 IGSF11Q5DX21 431 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 PAPPA-AS1Q5QFB9 102 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 DCST1Q5T197 706 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 OTUD1Q5VV17 481 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 C18orf63Q68DL7 685 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 KRT80Q6KB66 452 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 TEX38Q6PEX7 206 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 KCTD18Q6PI47 426 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 Q75L30 129 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF534Q76KX8 674 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CCDC186Q7Z3E2 898 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 HAUS6Q7Z4H7 955 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 GLRX5Q86SX6 157 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZC3HC1Q86WB0 502 aaKnown RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 APPL2Q8NEU8 664 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 SPATA22Q8NHS9 363 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CFAP61Q8NHU2 1237 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 THAP6Q8TBB0 222 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 MOAP1Q96BY2 351 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 RMDN1Q96DB5 314 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 NLRP4Q96MN2 994 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF830Q96NB3 372 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 LRRC3BQ96PB8 259 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 NUDCD1Q96RS6 583 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CDRT15Q96T59 188 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CCDC106Q9BWC9 280 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 C1QTNF7Q9BXJ2 289 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ALDH8A1Q9H2A2 487 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 EBF3Q9H4W6 596 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ANKZF1Q9H8Y5 726 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 IL17BQ9UHF5 180 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 TSPYL4Q9UJ04 414 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 PPIEQ9UNP9 301 aaKnown RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CACNA1IQ9P0X4 2223 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ABCC8Q09428 1581 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CFTRP13569 1480 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 A0A1W2PPM1 405 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 RPS10-NUDT3A0A1W2PQS6 291 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 A6NL46 340 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 EIF4E1BA6NMX2 242 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 H3BQ06 376 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 SOCS2O14508 198 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 PPEF2O14830 753 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 TNFRSF13BO14836 293 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 ANKRD28O15084 1053 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 ASAP2O43150 1006 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 RFPL2O75678 378 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 KCNK5O95279 499 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 CYP1A2P05177 515 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 PSG1P11464 419 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 HOXD3P31249 432 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 STX2P32856 288 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 RPL3P39023 403 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 CLDN20P56880 219 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 TAS2R38P59533 333 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 BNC1Q01954 994 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 RUNX1T1Q06455 604 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE2BQ13066 116 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 TRAF3Q13114 568 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 MAD2L1Q13257 205 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 OASLQ15646 514 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 HYAL4Q2M3T9 481 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 PRTGQ2VWP7 1150 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE2EQ4V326 116 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 KRBOX4Q5JUW0 171 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 FNBP1LQ5T0N5 605 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 CST9LP1Q5W188 147 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE2AQ6NT46 116 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 DUS1LQ6P1R4 473 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 FAM198BQ6UWH4 519 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 Q6ZTK2 550 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 INTS8Q75QN2 995 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 CHST3Q7LGC8 479 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 CAMKMTQ7Z624 323 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 TECPR1Q7Z6L1 1165 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 PALB2Q86YC2 1186 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 GALNT13Q8IUC8 556 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF595Q8IYB9 648 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMEM199Q8N511 208 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 GCSAMQ8N6F7 178 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 PRR26Q8N8Z3 221 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 MIGA1Q8NAN2 632 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 RBM15BQ8NDT2 890 aaKnown RBP3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 TSPAN14Q8NG11 270 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 OR5R1Q8NH85 324 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 GSDMBQ8TAX9 411 aa3.11□□□□□ -1.91
HMGB1P27-201ENST00000431429 MAGEC3Q8TD91 643 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms