RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 NAE1Q13564 534 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 KRR1Q13601 381 aaKnown RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 ALCAMQ13740 583 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 LARS2Q15031 903 aaKnown RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 TRADDQ15628 312 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC85BQ15834 202 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 FAM214AQ32MH5 1076 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 LRRC38Q5VT99 294 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 GPR107Q5VW38 600 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 NOTUMQ6P988 496 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 IL20RBQ6UXL0 311 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 GPR180Q86V85 440 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 C16orf71Q8IYS4 520 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 ADGRF4Q8IZF3 695 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 SETD9Q8NE22 299 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 SPATA20Q8TB22 786 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 FAM172AQ8WUF8 416 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 C22orf15Q8WYQ4 148 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 ELMO3Q96BJ8 720 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 PABPC5Q96DU9 382 aaKnown RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 C11orf24Q96F05 449 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 CCDC17Q96LX7 622 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 TREX2Q9BQ50 279 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 MGME1Q9BQP7 344 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 NAT9Q9BTE0 207 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 METTL22Q9BUU2 404 aaPredicted RBP5.34□□□□□ -1.55
PTPN4-203ENST00000430976 CACNG6Q9BXT2 260 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 GDAP2Q9NXN4 497 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 MIOXQ9UGB7 285 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 ABCG2Q9UNQ0 655 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 GRIP1Q9Y3R0 1128 aa5.34□□□□□ -1.55
PTPN4-203ENST00000430976 ST20-MTHFSA0A0A6YYL1 179 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 PNMA6EA0A0J9YXQ4 647 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 PGK1P00558 417 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 LDLRP01130 860 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 CALCAP01258 141 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 ELFN1P0C7U0 828 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 CYP2F1P24903 491 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 RBL1P28749 1068 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 RAP1GAPP47736 663 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 LEPRP48357 1165 aaKnown RBP5.34□□□□□ -1.56
PTPN4-203ENST00000430976 KRT81Q14533 505 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 DRAP1Q14919 205 aaPredicted RBP5.34□□□□□ -1.56
PTPN4-203ENST00000430976 CYB5R4Q7L1T6 521 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 ERMP1Q7Z2K6 904 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 ASPGQ86U10 573 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 PRPF39Q86UA1 669 aaKnown RBP5.34□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF589Q86UQ0 364 aaPredicted RBP5.34□□□□□ -1.56
PTPN4-203ENST00000430976 DCUN1D3Q8IWE4 304 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 OR2W6PQ8NHA6 318 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 ACTRT1Q8TDG2 376 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 BPIFB1Q8TDL5 484 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 GTF2H4Q92759 462 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 SGF29Q96ES7 293 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 FBXL18Q96ME1 805 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 NEURL2Q9BR09 285 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 MS4A5Q9H3V2 200 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 MRPL44Q9H9J2 332 aaKnown RBP5.34□□□□□ -1.56
PTPN4-203ENST00000430976 SAMSN1Q9NSI8 373 aaKnown RBP5.34□□□□□ -1.56
PTPN4-203ENST00000430976 RBM12Q9NTZ6 932 aaKnown RBP5.34□□□□□ -1.56
PTPN4-203ENST00000430976 POT1Q9NUX5 634 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 FEM1BQ9UK73 627 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 PTPN22Q9Y2R2 807 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 UGT2A1Q9Y4X1 527 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 PCDHA11Q9Y5I1 949 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 WDR7Q9Y4E6 1490 aa5.34□□□□□ -1.56
PTPN4-203ENST00000430976 NFKBIEO00221 500 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 DCXO43602 365 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ENTPD5O75356 428 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SRP72O76094 671 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 OPN1LWP04000 364 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 PGK2P07205 417 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 USP17L7P0C7H9 530 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ETS1P14921 441 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF25P17030 456 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF26P17031 533 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 COL9A1P20849 921 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 IL12RB1P42701 662 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 STK19P49842 368 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 BMXP51813 675 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 HNRNPFP52597 415 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF143P52747 638 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 BST1Q10588 318 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ITGA9Q13797 1035 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 TSNQ15631 228 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF568Q3ZCX4 644 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SLC36A3Q495N2 470 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 ZFP69Q49AA0 526 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 HSF5Q4G112 596 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 KIAA1755Q5JYT7 1200 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 LPCAT4Q643R3 524 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 RANBP10Q6VN20 620 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 SPATA19Q7Z5L4 167 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 AACSQ86V21 672 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 DHX40Q8IX18 779 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 NLGN4XQ8N0W4 816 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 TMA16Q96EY4 203 aaKnown RBP5.33□□□□□ -1.56
PTPN4-203ENST00000430976 KIF12Q96FN5 646 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 C9orf72Q96LT7 481 aa5.33□□□□□ -1.56
PTPN4-203ENST00000430976 DMRTB1Q96MA1 342 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms