RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 EPHX4Q8IUS5 362 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 CEP57L1Q8IYX8 460 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 NUP93Q8N1F7 819 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 ZBTB2Q8N680 514 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 MCPH1Q8NEM0 835 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 MOSPD2Q8NHP6 518 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 GDAP1Q8TB36 358 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 AFAP1L1Q8TED9 768 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 OIT3Q8WWZ8 545 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 RSPH1Q8WYR4 309 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 PTP4A1Q93096 173 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 MIB2Q96AX9 1013 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 PTERQ96BW5 349 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 RNF183Q96D59 192 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 PHF21BQ96EK2 531 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 ZC3HAV1LQ96H79 300 aaKnown RBP2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 ZNF830Q96NB3 372 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 CAMK1GQ96NX5 476 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 CDRT15Q96T59 188 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 THUMPD3Q9BV44 507 aaKnown RBP2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 MRPL9Q9BYD2 267 aaKnown RBP2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 LHPPQ9H008 270 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 HIPK2Q9H2X6 1198 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 PIGMQ9H3S5 423 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 TRPV4Q9HBA0 871 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 MAGEE1Q9HCI5 957 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 MTRRQ9UBK8 725 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 RASAL2Q9UJF2 1139 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 CLIC4Q9Y696 253 aa2.97□□□□□ -1.93
HMGB1P9-201ENST00000429856 A0A1W2PPM1 405 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 BECN2A8MW95 431 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 C19orf81C9J6K1 198 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 INAFM1C9JVW0 142 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PRSS44E7EML9 344 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 I6L893 689 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 VCYO14598 125 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 OGG1O15527 345 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TOMM70O94826 608 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZWINTO95229 277 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 KCNK5O95279 499 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PENKP01210 267 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 FYNP06241 537 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CYC1P08574 325 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 SUPT20HL2P0C7V6 817 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ETFAP13804 333 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 FDPSP14324 419 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZNF182P17025 639 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 NAGAP17050 411 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 MYF6P23409 242 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TNFRSF8P28908 595 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 DCTDP32321 178 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CSE1LP55060 971 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CDH13P55290 713 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 YBEYP58557 167 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TAS2R40P59535 323 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 HNRNPKP61978 463 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 SORDQ00796 357 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CRYZQ08257 329 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 Q0VFX4 171 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ST3GAL1Q11201 340 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 GRSF1Q12849 480 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 RALGDSQ12967 914 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TRAF1Q13077 416 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CAPSQ13938 189 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 NAB2Q15742 525 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZNF284Q2VY69 593 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PLEKHO1Q53GL0 409 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TDRD12Q587J7 1177 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 EFHC1Q5JVL4 640 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PRAMEF19Q5SWL8 479 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ANKRD54Q6NXT1 300 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZNF449Q6P9G9 518 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CPLX2Q6PUV4 134 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 Q6ZSV7 163 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TAOK1Q7L7X3 1001 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CHST3Q7LGC8 479 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 GSTA5Q7RTV2 222 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 OTOAQ7RTW8 1153 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TSPAN33Q86UF1 283 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 METTL23Q86XA0 190 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 DENND6AQ8IWF6 608 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZNF595Q8IYB9 648 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PARP16Q8N5Y8 322 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 PRR26Q8N8Z3 221 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 MSANTD4Q8NCY6 345 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 RBM15BQ8NDT2 890 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CFAP61Q8NHU2 1237 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 FIBINQ8TAL6 211 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ELP5Q8TE02 316 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 DEPDC1BQ8WUY9 529 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 SEPT1Q8WYJ6 367 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 LPGAT1Q92604 370 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 RRNAD1Q96FB5 475 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 CDHR1Q96JP9 859 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 APOLD1Q96LR9 279 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 TMEM47Q9BQJ4 181 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZPBPQ9BS86 351 aa2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 MRPL1Q9BYD6 325 aaKnown RBP2.96□□□□□ -1.94
HMGB1P9-201ENST00000429856 SEZ6LQ9BYH1 1024 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms