RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CA5AP35218 305 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ILF3Q12906 894 aaKnown RBP eCLIP14.41□□□□□ -0.1
SGCE-204ENST00000428696 DNAJC21Q5F1R6 531 aaKnown RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 SLC30A9Q6PML9 568 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ZNF572Q7Z3I7 529 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 SNX20Q7Z614 316 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 GKN2Q86XP6 184 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 TRAPPC5Q8IUR0 188 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 PDIK1LQ8N165 341 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 PNPLA1Q8N8W4 532 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 BBOF1Q8ND07 529 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 FAM46DQ8NEK8 389 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 CCL4L1Q8NHW4 92 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 ULK4Q96C45 1275 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 OR2M4Q96R27 311 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 TRIM56Q9BRZ2 755 aaKnown RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 ZCCHC2Q9C0B9 1178 aaKnown RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 DPEP2Q9H4A9 486 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 NFKBIL1Q9UBC1 381 aaPredicted RBP14.41□□□□□ -0.1
SGCE-204ENST00000428696 DGKBQ9Y6T7 804 aa14.41□□□□□ -0.1
SGCE-204ENST00000428696 MAGEB16A2A368 324 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 OR2AG2A6NM03 316 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 GOLGA8KD6RF30 607 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 GOLGA8TH3BQL2 631 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 TRIM38O00635 465 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 YY2O15391 372 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 VEGFDO43915 354 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 SNX2O60749 519 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 BANF1O75531 89 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 SEC31AO94979 1220 aaKnown RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 LDOC1O95751 146 aaPredicted RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 IVLP07476 585 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 RALBP11234 206 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 MYF5P13349 255 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 ACP5P13686 325 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 AK4P27144 223 aaPredicted RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 PBLDP30039 288 aaPredicted RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 GUCY2DQ02846 1103 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 CACNG1Q06432 222 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 DHX9Q08211 1270 aaKnown RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 KHDC1Q4VXA5 237 aaKnown RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 PYCR3Q53H96 274 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 FASTKD1Q53R41 847 aaKnown RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 HIBCHQ6NVY1 386 aaPredicted RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 HOOK3Q86VS8 718 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 SERPINA9Q86WD7 417 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 FSTL5Q8N475 847 aaPredicted RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 NOA1Q8NC60 698 aaKnown RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 OR13J1Q8NGT2 312 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 OR4L1Q8NH43 312 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.4□□□□□ -0.1
SGCE-204ENST00000428696 ZNF669Q96BR6 464 aaPredicted RBP14.4□□□□□ -0.1
SGCE-204ENST00000428696 MFSD3Q96ES6 412 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 SGF29Q96ES7 293 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 STAMBPL1Q96FJ0 436 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 VPS35Q96QK1 796 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 TTC1Q99614 292 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 COPS8Q99627 209 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 CLPBQ9H078 707 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 OSGEPL1Q9H4B0 414 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 VPS18Q9P253 973 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 FAM8A1Q9UBU6 413 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 FTSJ1Q9UET6 329 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 RPS6KL1Q9Y6S9 549 aa14.4□□□□□ -0.1
SGCE-204ENST00000428696 PCDH15Q96QU1 1955 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 TRBV23OR9-2A0A075B6M9 112 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 NDC80O14777 642 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 SIGLEC6O43699 453 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 PAMP19021 973 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 PMLP29590 882 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 ID4P47928 161 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 NOVA1P51513 510 aaKnown RBP14.39□□□□□ -0.11
SGCE-204ENST00000428696 PLTPP55058 493 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 ARL4CP56559 192 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 DAB2P98082 770 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 CTBSQ01459 385 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 BIRC2Q13490 618 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 HIF1AQ16665 826 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 INSCQ1MX18 579 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 GPR33Q49SQ1 333 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 PSAPL1Q6NUJ1 521 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 TMEM220Q6QAJ8 160 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 AFTPHQ6ULP2 937 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 LDB1Q86U70 411 aaPredicted RBP14.39□□□□□ -0.11
SGCE-204ENST00000428696 CCDC25Q86WR0 208 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 ANKMY2Q8IV38 441 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 PIANPQ8IYJ0 282 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 NXPE1Q8N323 547 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 RASGEF1AQ8N9B8 481 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 CFAP36Q96G28 342 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 CNDP2Q96KP4 475 aaKnown RBP14.39□□□□□ -0.11
SGCE-204ENST00000428696 RTKNQ9BST9 563 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 KIFC1Q9BW19 673 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 GSDMCQ9BYG8 508 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 CATSPERZQ9NTU4 200 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 IL1RAPL1Q9NZN1 696 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 PCOLCE2Q9UKZ9 415 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 SOX13Q9UN79 622 aa14.39□□□□□ -0.11
SGCE-204ENST00000428696 GPR34Q9UPC5 381 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms