RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 AMACRQ9UHK6 382 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 TUBD1Q9UJT1 453 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 ADGRG1Q9Y653 693 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 RPS6KL1Q9Y6S9 549 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 CAPN5O15484 640 aaPredicted RBP16.32■□□□□ 0.2
VARS-216ENST00000428445 SLC25A14O95258 325 aaPredicted RBP16.32■□□□□ 0.2
VARS-216ENST00000428445 DLSTP36957 453 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 STAT5AP42229 794 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 EPHA4P54764 986 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 ERV3-1Q14264 604 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 HADHQ16836 314 aaKnown RBP16.32■□□□□ 0.2
VARS-216ENST00000428445 KHDC1Q4VXA5 237 aaKnown RBP16.32■□□□□ 0.2
VARS-216ENST00000428445 CCDC13Q8IYE1 715 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 CCHCR1Q8TD31 782 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 APOBEC4Q8WW27 367 aaKnown RBP16.32■□□□□ 0.2
VARS-216ENST00000428445 RAPGEF5Q92565 580 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 FATE1Q969F0 183 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 C9orf72Q96LT7 481 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 ZPBPQ9BS86 351 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 ULBP3Q9BZM4 244 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 CARD9Q9H257 536 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 RMI1Q9H9A7 625 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 CROTQ9UKG9 612 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 DNPEPQ9ULA0 475 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 TP53TG5Q9Y2B4 290 aa16.32■□□□□ 0.2
VARS-216ENST00000428445 KIR2DS5A0A0G2JLQ3 304 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 A0A0G2JNG1 304 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 A0A1W2PQJ5 194 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 PRR19A6NJB7 356 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 KIR2DS3K7RE56 304 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 KATNA1O75449 491 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 SERPING1P05155 500 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 AMD1P17707 334 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 RPL10P27635 214 aaKnown RBP16.31■□□□□ 0.2
VARS-216ENST00000428445 KIR2DS5Q14953 304 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 IQCB1Q15051 598 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 PCSK7Q16549 785 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 ALKBH5Q6P6C2 394 aaKnown RBP16.31■□□□□ 0.2
VARS-216ENST00000428445 PLXDC1Q8IUK5 500 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 PHYKPLQ8IUZ5 450 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 OR6C1Q96RD1 312 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 PACSIN1Q9BY11 444 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.31■□□□□ 0.2
VARS-216ENST00000428445 ZFYVE1Q9HBF4 777 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 TRIM39Q9HCM9 518 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 ANAPC2Q9UJX6 822 aa16.31■□□□□ 0.2
VARS-216ENST00000428445 TNRC6AQ8NDV7 1962 aaKnown RBP16.31■□□□□ 0.2
VARS-216ENST00000428445 MN1Q10571 1320 aaPredicted RBP16.3■□□□□ 0.2
VARS-216ENST00000428445 OR52A4PA6NMU1 304 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 AURKAO14965 403 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 MTSS1O43312 755 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 KIAA0754O94854 1291 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 UBXN7O94888 489 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 VIPP01282 170 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 C9P02748 559 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 BRAFP15056 766 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 XRCC1P18887 633 aaPredicted RBP16.3■□□□□ 0.2
VARS-216ENST00000428445 CA4P22748 312 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
VARS-216ENST00000428445 MLLT10P55197 1068 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 RPL26P61254 145 aaKnown RBP16.3■□□□□ 0.2
VARS-216ENST00000428445 PPP1CAP62136 330 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 INSCQ1MX18 579 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 LACTB2Q53H82 288 aaPredicted RBP16.3■□□□□ 0.2
VARS-216ENST00000428445 ZFYVE27Q5T4F4 411 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 NPNTQ6UXI9 565 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 FAM92BQ6ZTR7 304 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 TMEM26Q6ZUK4 368 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 RSC1A1Q92681 617 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 ZNF670Q9BS34 389 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 BPIFA1Q9NP55 256 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 TMPRSS11EQ9UL52 423 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 RPL26L1Q9UNX3 145 aaKnown RBP16.3■□□□□ 0.2
VARS-216ENST00000428445 KCNMB2Q9Y691 235 aa16.3■□□□□ 0.2
VARS-216ENST00000428445 UTP20O75691 2785 aaKnown RBP16.3■□□□□ 0.2
VARS-216ENST00000428445 NBPF19A0A087WUL8 3843 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 LILRA5A6NI73 299 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 OR5K4A6NMS3 321 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 PDZK1P1A8MUH7 402 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 RASSF9O75901 435 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 PROSCO94903 275 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 SLC2A4P14672 509 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 ZNF7P17097 686 aaPredicted RBP16.29■□□□□ 0.2
VARS-216ENST00000428445 MAN1A1P33908 653 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 PBX1P40424 430 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 PDK2Q15119 407 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 ZNF569Q5MCW4 686 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 C6orf15Q6UXA7 325 aaPredicted RBP16.29■□□□□ 0.2
VARS-216ENST00000428445 TMC3Q7Z5M5 1100 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 RASGRP3Q8IV61 690 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 ZNF547Q8IVP9 402 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 TRIM48Q8IWZ4 208 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 ESX1Q8N693 406 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 SPATA22Q8NHS9 363 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 GLYATL1Q969I3 302 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 HDAC11Q96DB2 347 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 AGAP3Q96P47 875 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 TRIB3Q96RU7 358 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms