RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 APOC2P02655 101 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 RBL1P28749 1068 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 TNNT3P45378 269 aaPredicted RBP18.18■□□□□ 0.5
PSPC1-202ENST00000427943 LIMK2P53671 638 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 CLPPQ16740 277 aaPredicted RBP18.18■□□□□ 0.5
PSPC1-202ENST00000427943 KHDC1Q4VXA5 237 aaKnown RBP18.18■□□□□ 0.5
PSPC1-202ENST00000427943 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.18■□□□□ 0.5
PSPC1-202ENST00000427943 PDPK2PQ6A1A2 396 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 TTC30BQ8N4P2 665 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 SLC39A7Q92504 469 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 AHCYL2Q96HN2 611 aaKnown RBP18.18■□□□□ 0.5
PSPC1-202ENST00000427943 VAT1Q99536 393 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 LACRTQ9GZZ8 138 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 TRIM39Q9HCM9 518 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 KLC4Q9NSK0 619 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 AKAP7Q9P0M2 348 aaPredicted RBP18.18■□□□□ 0.5
PSPC1-202ENST00000427943 BAHCC1Q9P281 2608 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 C9orf172C9J069 976 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 NVLO15381 856 aaKnown RBP18.17■□□□□ 0.5
PSPC1-202ENST00000427943 PJA2O43164 708 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 BUD23O43709 281 aaKnown RBP18.17■□□□□ 0.5
PSPC1-202ENST00000427943 F3P13726 295 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 MAPK9P45984 424 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 GPLD1P80108 840 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 OTUD4Q01804 1114 aaKnown RBP18.17■□□□□ 0.5
PSPC1-202ENST00000427943 SRSF6Q13247 344 aaKnown RBP18.17■□□□□ 0.5
PSPC1-202ENST00000427943 SLC1A5Q15758 541 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 INSCQ1MX18 579 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 AADACL2Q6P093 401 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 IYDQ6PHW0 289 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 CCDC81Q6ZN84 652 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 ZFAND4Q86XD8 727 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 OR4D9Q8NGE8 314 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 ACTL9Q8TC94 416 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 BLOC1S5Q8TDH9 187 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 PLEKHG4BQ96PX9 1271 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 SRPK1Q96SB4 655 aaKnown RBP18.17■□□□□ 0.5
PSPC1-202ENST00000427943 FAM118BQ9BPY3 351 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 FSD1LQ9BXM9 530 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 STN1Q9H668 368 aaKnown RBP18.17■□□□□ 0.5
PSPC1-202ENST00000427943 PRDM8Q9NQV8 689 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 SLC23A2Q9UGH3 650 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 ACSL6Q9UKU0 697 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 TMPRSS11EQ9UL52 423 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 PCDHA3Q9Y5H8 950 aa18.17■□□□□ 0.5
PSPC1-202ENST00000427943 K7ENP7 123 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 HGSO14964 777 aaPredicted RBP18.16■□□□□ 0.5
PSPC1-202ENST00000427943 GPR39O43194 453 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 DUX1O43812 170 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 THRAP10827 490 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 LIPCP11150 499 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 SLC2A4P14672 509 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 HMGCLP35914 325 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 COPS2P61201 443 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 MPP3Q13368 585 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 XRCC4Q13426 336 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 ATP13A5Q4VNC0 1218 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 INO80CQ6PI98 192 aaPredicted RBP18.16■□□□□ 0.5
PSPC1-202ENST00000427943 PCSK4Q6UW60 755 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 GLT6D1Q7Z4J2 308 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 SLC9B2Q86UD5 537 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 LRRTM4Q86VH4 590 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 OR10G6Q8NH81 332 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 PMEPA1Q969W9 287 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 CCNL2Q96S94 520 aaPredicted RBP18.16■□□□□ 0.5
PSPC1-202ENST00000427943 GORASP1Q9BQQ3 440 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 OSBPL8Q9BZF1 889 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 GBA3Q9H227 469 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 SARS2Q9NP81 518 aaKnown RBP18.16■□□□□ 0.5
PSPC1-202ENST00000427943 DNAJC16Q9Y2G8 782 aa18.16■□□□□ 0.5
PSPC1-202ENST00000427943 BTNL10A8MVZ5 291 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 CHUKO15111 745 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 HLA-DPA1P20036 260 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 CTNNA2P26232 953 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 VAV2P52735 878 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 SQSTM1Q13501 440 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 TRA2AQ13595 282 aaKnown RBP eCLIP18.15■□□□□ 0.5
PSPC1-202ENST00000427943 SEPT7Q16181 437 aaKnown RBP18.15■□□□□ 0.5
PSPC1-202ENST00000427943 SNAP47Q5SQN1 464 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 KIAA1614Q5VZ46 1190 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 TMEM71Q6P5X7 295 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 FAM151BQ6UXP7 276 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 KIAA1328Q86T90 577 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 GDAP1Q8TB36 358 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 ALG3Q92685 438 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 VPS35Q96QK1 796 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 FICDQ9BVA6 458 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 TRABDQ9H4I3 376 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 SCHIP1Q9P0W5 487 aaPredicted RBP18.15■□□□□ 0.5
PSPC1-202ENST00000427943 TRHDEQ9UKU6 1024 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 KALRNO60229 2985 aa18.15■□□□□ 0.5
PSPC1-202ENST00000427943 FASNP49327 2511 aaKnown RBP18.14■□□□□ 0.49
PSPC1-202ENST00000427943 KIR2DS5A0A0G2JLQ3 304 aa18.14■□□□□ 0.49
PSPC1-202ENST00000427943 A0A0G2JNG1 304 aa18.14■□□□□ 0.49
PSPC1-202ENST00000427943 CCDC66A2RUB6 948 aa18.14■□□□□ 0.49
PSPC1-202ENST00000427943 GRID2IPA4D2P6 1211 aa18.14■□□□□ 0.49
PSPC1-202ENST00000427943 A8MU76 341 aa18.14■□□□□ 0.49
PSPC1-202ENST00000427943 GPR89AB7ZAQ6 455 aa18.14■□□□□ 0.49
PSPC1-202ENST00000427943 KIR2DS3K7RE56 304 aa18.14■□□□□ 0.49
PSPC1-202ENST00000427943 ERVH48-1M5A8F1 160 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms