RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TMLHEQ9NVH6 421 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 KLQ9UEF7 1012 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SNX13Q9Y5W8 968 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 C15orf38-AP3S2A0A0A6YYH1 394 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ZNF839A8K0R7 811 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 QSOX1O00391 747 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 DCNP07585 359 aaKnown RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ITGA2BP08514 1039 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SLC2A4P14672 509 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 WNT7BP56706 349 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 NRF1Q16656 503 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 PITRM1Q5JRX3 1037 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 PCID2Q5JVF3 399 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ANKRD54Q6NXT1 300 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ARPINQ7Z6K5 226 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 KBTBD6Q86V97 674 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 FNIP1Q8TF40 1166 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 PRKAG3Q9UGI9 489 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 TMA7Q9Y2S6 64 aaKnown RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 CAPN8A6NHC0 703 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 A6NHS1 94 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 C2CD4BA6NLJ0 364 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SYCE1LA8MT33 242 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 BEST1O76090 585 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SERPINA6P08185 405 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 DGKAP23743 735 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 NAGLUP54802 743 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 VWA5B1Q5TIE3 1220 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 GIPC3Q8TF64 312 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 TUBGCP3Q96CW5 907 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 VPS50Q96JG6 964 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 OR2AG1Q9H205 316 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 FAM124BQ9H5Z6 455 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 PTPRHQ9HD43 1115 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 DDX28Q9NUL7 540 aaKnown RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 COMMD8Q9NX08 183 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SH3GLB1Q9Y371 365 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 NRAPQ86VF7 1730 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ILVBLA1L0T0 632 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 H3BMM5 538 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 PIGNO95427 931 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SEC24AO95486 1093 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 MT-CYBP00156 380 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 TTPAP49638 278 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ABCE1P61221 599 aaKnown RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 FOLH1Q04609 750 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 PPM1JQ5JR12 505 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 TANGO2Q6ICL3 276 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 DCAKDQ8WVC6 231 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 FOXJ1Q92949 421 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 NMRAL1Q9HBL8 299 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 MIEF1Q9NQG6 463 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 WNT9AO14904 365 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 KRT75O95678 551 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 FGFR3P22607 806 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 GKP32189 559 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 GALNTL6Q49A17 601 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 TMEM220Q6QAJ8 160 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 RHBDD1Q8TEB9 315 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 CERS2Q96G23 380 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 ZFRQ96KR1 1074 aaKnown RBP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 IL22Q9GZX6 179 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 ADNPQ9H2P0 1102 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 VPS45Q9NRW7 570 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 KLF15Q9UIH9 416 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 HS3ST4Q9Y661 456 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 A0A088AWK7 358 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 CNTN5O94779 1100 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 SYPP08247 313 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 ZNF10P21506 573 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 CCNG1P51959 295 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 CA9Q16790 459 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 PRRT3Q5FWE3 981 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 DGKKQ5KSL6 1271 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 PACS1Q6VY07 963 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 EBF4Q9BQW3 602 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 TMEM79Q9BSE2 394 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 SLC46A2Q9BY10 475 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 RUBCNLQ9H714 662 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 AHSPQ9NZD4 102 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 CXorf49A8MYA2 514 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 MAN1A2O60476 641 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 UQCRBP14927 111 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 DRD1P21728 446 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 CSTF2P33240 577 aaKnown RBP eCLIP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 TEDDM1Q5T9Z0 273 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 SPATA6LQ8N4H0 392 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 IL22RA1Q8N6P7 574 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 PCDH20Q8N6Y1 951 aaKnown RBP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 TRIM15Q9C019 465 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 CAB39LQ9H9S4 337 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 SYBUQ9NX95 663 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 NCKIPSDQ9NZQ3 722 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 SLC17A6Q9P2U8 582 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 DNMT3BQ9UBC3 853 aaKnown RBP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-204ENST00000427724 GNPTGQ9UJJ9 305 aa10.57□□□□□ -0.72
TCOF1-204ENST00000427724 DYTNA2CJ06 578 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms