RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CHST12Q9NRB3 414 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 IL17RBQ9NRM6 502 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 RAB6BQ9NRW1 208 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 OXSMQ9NWU1 459 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMOD3Q9NYL9 352 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ERAP1Q9NZ08 941 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 MPP6Q9NZW5 540 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 FNIP2Q9P278 1114 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 FBXO40Q9UH90 709 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 UBQLN2Q9UHD9 624 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GTF2IRD1Q9UHL9 959 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TRMT112Q9UI30 125 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CDH9Q9ULB4 789 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 KLF2Q9Y5W3 355 aaPredicted RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 NHSQ6T4R5 1651 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 BCLAF3A2AJT9 711 aaKnown RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 MEIOCA2RUB1 952 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 TCAF2A6NFQ2 919 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR6C70A6NIJ9 312 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC15A5A6NIM6 579 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 METTL15A6NJ78 407 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 HACD1B0YJ81 288 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 TRIM77I1YAP6 450 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC1A7O00341 560 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 NEMP1O14524 444 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYB561D2O14569 222 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CA12O43570 354 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 PI15O43692 258 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ORC5O43913 435 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 AIREO43918 545 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SSX5O60225 188 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CPNE3O75131 537 aaKnown RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 RFPL3O75679 317 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZMPSTE24O75844 475 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYP7B1O75881 506 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC22A5O76082 557 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 FGF18O76093 207 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SORBS2O94875 1100 aaKnown RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 WDR47O94967 919 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 F9P00740 461 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 GNAO1P09471 354 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ITGAMP11215 1152 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 HLA-EP13747 358 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 GLULP15104 373 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 PCSK2P16519 638 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF30P17039 623 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 TNNI3P19429 210 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 TFEBP19484 476 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 TFE3P19532 575 aaPredicted RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 MMP8P22894 467 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 KELP23276 732 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 PTBP1P26599 531 aaKnown RBP eCLIP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 PSMB9P28065 219 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ADORA2AP29274 412 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 GNA15P30679 374 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CTSKP43235 329 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 MAGEA12P43365 314 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 GCLMP48507 274 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 NR2C2P49116 596 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCT3P49368 545 aaKnown RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SEPHS1P49903 392 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 GDI2P50395 445 aaKnown RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CPT1AP50416 773 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC7A2P52569 658 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 DNAJB13P59910 316 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 POLR2GP62487 172 aaKnown RBP eCLIP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 POU6F2P78424 691 aaPredicted RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 IFITM3Q01628 133 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 UBE3AQ05086 875 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CLCQ05315 142 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ELP6Q0PNE2 266 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 RIN1Q13671 783 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 BMPR2Q13873 1038 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 KEAP1Q14145 624 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 EFR3AQ14156 821 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 MFSD13AQ14CX5 517 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 PLCL1Q15111 1095 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 Q3ZCU0 254 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 PARP15Q460N3 678 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 MTERF2Q49AM1 385 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 BRDTQ58F21 947 aaPredicted RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 FAM76BQ5HYJ3 339 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 INTS6LQ5JSJ4 861 aaKnown RBP5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ANKRD22Q5VYY1 191 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ARHGAP17Q68EM7 881 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ELP2Q6IA86 826 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 RETSATQ6NUM9 610 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 BRAT1Q6PJG6 821 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 CNSTQ6PJW8 725 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 PLET1Q6UQ28 207 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 RANBP10Q6VN20 620 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SCARA5Q6ZMJ2 495 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 MACC1Q6ZN28 852 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 GDPGP1Q6ZNW5 385 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 MAVSQ7Z434 540 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 ASPGQ86U10 573 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC22A9Q8IVM8 553 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 DNAJC10Q8IXB1 793 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 TIGD4Q8IY51 512 aa5.57□□□□□ -1.52
VTI1BP4-201ENST00000427516 SYTL1Q8IYJ3 562 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms