RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 TMEM74Q96NL1 305 aa11.53□□□□□ -0.56
FIRRE-201ENST00000427391 INTS10Q9NVR2 710 aaKnown RBP11.53□□□□□ -0.56
FIRRE-201ENST00000427391 CD274Q9NZQ7 290 aa11.53□□□□□ -0.56
FIRRE-201ENST00000427391 BCAP29Q9UHQ4 241 aa11.53□□□□□ -0.56
FIRRE-201ENST00000427391 TRMT6Q9UJA5 497 aaKnown RBP11.53□□□□□ -0.56
FIRRE-201ENST00000427391 PCTPQ9UKL6 214 aa11.53□□□□□ -0.56
FIRRE-201ENST00000427391 LZTS1Q9Y250 596 aa11.53□□□□□ -0.56
FIRRE-201ENST00000427391 A0A1B0GVM2 712 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 ILVBLA1L0T0 632 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 ANGPT2O15123 496 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 MT-ND1P03886 318 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 NCK1P16333 377 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 LBPP18428 481 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 PSMD8P48556 350 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 ALDH7A1P49419 539 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 HTR6P50406 440 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 KPNA1P52294 538 aaPredicted RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 MAP7D1Q3KQU3 841 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 PAGE3Q5JUK9 113 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 SAMD4BQ5PRF9 694 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 ADGRF1Q5T601 910 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 LYSMD3Q7Z3D4 306 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 DHFR2Q86XF0 187 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 CAMK1DQ8IU85 385 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 FAM126BQ8IXS8 530 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 CRIPAKQ8N1N5 446 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 TTC30BQ8N4P2 665 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 CLDN19Q8N6F1 224 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 NMD3Q96D46 503 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 HGH1Q9BTY7 390 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 BOCQ9BWV1 1114 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 GRIP2Q9C0E4 1043 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 SYTL2Q9HCH5 934 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 OAS3Q9Y6K5 1087 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 V9GYQ6 96 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 C5orf42Q9H799 3197 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 TCRBV3S1A0A5B6 114 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 H0Y626 953 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 PDLIM1O00151 329 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 SMAD6O43541 496 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 AKAP10O43572 662 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 AHCYL1O43865 530 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 PENKP01210 267 aaPredicted RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 TFAP2AP05549 437 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 RPS17P08708 135 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 OXTRP30559 389 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 SLC8B1Q6J4K2 584 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 FAM151BQ6UXP7 276 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 GET4Q7L5D6 327 aaPredicted RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 SEPT8Q92599 483 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 PEX13Q92968 403 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 ABCG8Q9H221 673 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 ELAC1Q9H777 363 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 SPATS2LQ9NUQ6 558 aaKnown RBP11.52□□□□□ -0.57
FIRRE-201ENST00000427391 TRPM5Q9NZQ8 1165 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 TBC1D30Q9Y2I9 924 aa11.52□□□□□ -0.57
FIRRE-201ENST00000427391 MYO7AQ13402 2215 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 E5RI56 91 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 KATNA1O75449 491 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 SLC6A2P23975 617 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 PIK3CGP48736 1102 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 ACADVLP49748 655 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 SMAD3P84022 425 aaKnown RBP11.51□□□□□ -0.57
FIRRE-201ENST00000427391 IKBKEQ14164 716 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 LKAAEAR1Q8TD35 194 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 GPATCH1Q9BRR8 931 aaKnown RBP11.51□□□□□ -0.57
FIRRE-201ENST00000427391 CENPKQ9BS16 269 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 HMX1Q9NP08 348 aaPredicted RBP11.51□□□□□ -0.57
FIRRE-201ENST00000427391 MTRRQ9UBK8 725 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 LHX3Q9UBR4 397 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 NDUFAF1Q9Y375 327 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 RNF11Q9Y3C5 154 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 GPR45Q9Y5Y3 372 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 SOCS2O14508 198 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 VPS26AO75436 327 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 ALDH1A1P00352 501 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 PIM1P11309 404 aaPredicted RBP11.51□□□□□ -0.57
FIRRE-201ENST00000427391 IL12AP29459 219 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 RHOAP61586 193 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 CREB5Q02930 508 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 FOXD4Q12950 439 aaPredicted RBP11.51□□□□□ -0.57
FIRRE-201ENST00000427391 USP41Q3LFD5 358 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 TIGD2Q4W5G0 525 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 TXNDC8Q6A555 127 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 LETMD1Q6P1Q0 360 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 GPSM1Q86YR5 675 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 APLFQ8IW19 511 aaPredicted RBP11.51□□□□□ -0.57
FIRRE-201ENST00000427391 TRIM4Q9C037 500 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 FAM192AQ9GZU8 254 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 POPDC3Q9HBV1 291 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 SLC52A3Q9NQ40 469 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 SDR39U1Q9NRG7 319 aaPredicted RBP11.51□□□□□ -0.57
FIRRE-201ENST00000427391 RAB26Q9ULW5 256 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 CLEC4EQ9ULY5 219 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 YIPF1Q9Y548 306 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 GBF1Q92538 1859 aa11.51□□□□□ -0.57
FIRRE-201ENST00000427391 ZFC3H1O60293 1989 aaKnown RBP11.5□□□□□ -0.57
FIRRE-201ENST00000427391 GUCA1CO95843 209 aa11.5□□□□□ -0.57
FIRRE-201ENST00000427391 CNPP09543 421 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms