RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 LLGL2Q6P1M3 1020 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 CAMK1GQ96NX5 476 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 ALG5Q9Y673 324 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 CDKL1Q00532 357 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 OR8H3Q8N146 312 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 ANKFN1Q8N957 763 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 CDH22Q9UJ99 828 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 TSPAN3O60637 253 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 ATF4P18848 351 aaPredicted RBP14.35□□□□□ -0.11
PTPN13-203ENST00000427191 OTOP1Q7RTM1 612 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 CLEC10AQ8IUN9 316 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 GPSM3Q9Y4H4 160 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 LINC00032P0C843 101 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
PTPN13-203ENST00000427191 CBLBQ13191 982 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 ALG2Q9H553 416 aa14.35□□□□□ -0.11
PTPN13-203ENST00000427191 PRORSD1PA6NEY8 169 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 CXorf57Q6NSI4 855 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 AARSD1Q9BTE6 412 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 RRAGCQ9HB90 399 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 HEBP2Q9Y5Z4 205 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 RIC1Q4ADV7 1423 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 ALOX15BO15296 676 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 OR1I1O60431 355 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 ITGA10O75578 1167 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 TFPIP10646 304 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 C9orf131Q5VYM1 1079 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 GPR135Q8IZ08 494 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 ZNF433Q8N7K0 673 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 HASPINQ8TF76 798 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 MTMR10Q9NXD2 777 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 COPS7AQ9UBW8 275 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 ZNF180Q9UJW8 692 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 ARMC10Q8N2F6 343 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 MARK4Q96L34 752 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 PRICKLE1Q96MT3 831 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 DNAJC11Q9NVH1 559 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 HCN3Q9P1Z3 774 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 MANSC4A6NHS7 340 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 LRRC10BA6NIK2 292 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 E7ENX8 843 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 EDF1O60869 148 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 FOSL2P15408 326 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 EPHA3P29320 983 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 EGFLAMQ63HQ2 1017 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 GRIN3AQ8TCU5 1115 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 CNDP2Q96KP4 475 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 INTS10Q9NVR2 710 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 TCRBV9S1A1TA0A576 114 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 RGL2O15211 777 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 MID1O15344 667 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 CCNB2O95067 398 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 AGR2O95994 175 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 BPGMP07738 259 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 BDNFP23560 247 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 RTP1P59025 263 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 ARF3P61204 181 aaPredicted RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 TSPAN5P62079 268 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 ARF1P84077 181 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 HDDC3Q8N4P3 179 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 XKR8Q9H6D3 395 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 FARSBQ9NSD9 589 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 AGO1Q9UL18 857 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 TIPRLO75663 272 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 FAM35AQ86V20 835 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 SENP8Q96LD8 212 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 C5orf34Q96MH7 638 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 PHB2Q99623 299 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 MAF1Q9H063 256 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 DNAJC5Q9H3Z4 198 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 CCDC86Q9H6F5 360 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 MECP2P51608 486 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 FIP1L1Q6UN15 594 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 SERPINA13PQ6UXR4 307 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 TRABD2AQ86V40 505 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 METTL21AQ8WXB1 218 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 YTHDF1Q9BYJ9 559 aaKnown RBP14.34□□□□□ -0.11
PTPN13-203ENST00000427191 CHST7Q9NS84 486 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 PDE10AQ9Y233 779 aa14.34□□□□□ -0.11
PTPN13-203ENST00000427191 FSHRP23945 695 aa14.33□□□□□ -0.11
PTPN13-203ENST00000427191 TIGD4Q8IY51 512 aa14.33□□□□□ -0.11
PTPN13-203ENST00000427191 SMG7Q92540 1137 aaKnown RBP14.33□□□□□ -0.11
PTPN13-203ENST00000427191 DNASE1L2Q92874 299 aa14.33□□□□□ -0.11
PTPN13-203ENST00000427191 NXNL1Q96CM4 212 aa14.33□□□□□ -0.11
PTPN13-203ENST00000427191 SEMA3CQ99985 751 aa14.33□□□□□ -0.11
PTPN13-203ENST00000427191 RABL2AQ9UBK7 228 aaPredicted RBP14.33□□□□□ -0.11
PTPN13-203ENST00000427191 RABL2BQ9UNT1 228 aa14.33□□□□□ -0.11
PTPN13-203ENST00000427191 hCG_1818297A0A087WSY0 165 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 PRAMEF12O95522 483 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 PRPS2P11908 318 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 CDC25CP30307 473 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 PTPN9P43378 593 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 KHKP50053 298 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 STXBP1P61764 594 aaKnown RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ADAM17P78536 824 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ITGA7Q13683 1181 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms