RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ARL5AQ9Y689 179 aa7.37□□□□□ -1.23
LINC01049-201ENST00000426840 KCNMB2Q9Y691 235 aa7.37□□□□□ -1.23
LINC01049-201ENST00000426840 DMDP11532 3685 aa7.37□□□□□ -1.23
LINC01049-201ENST00000426840 TDRD6O60522 2096 aaKnown RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 TMEM202A6NGA9 273 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 C2orf81A6NN90 581 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 FADS2P1A8MWK0 482 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 TP73O15350 636 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 STX7O15400 261 aaKnown RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 RAD51CO43502 376 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 FOXD2O60548 495 aaPredicted RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A9O60656 530 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 CRTAMO95727 393 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 FUCA1P04066 466 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 SYPP08247 313 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 TSHRP16473 764 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A6P19224 532 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A1P22309 533 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A4P22310 534 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 ADRA1DP25100 572 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A3P35503 534 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A5P35504 534 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 GPR1P46091 355 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 RXRGP48443 463 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 ZNF140P52738 457 aaPredicted RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 C21orf59P57076 290 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 KIAA1024LP59773 190 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 DCDC1P59894 354 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 CKAP4Q07065 602 aaKnown RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 BNIP3Q12983 259 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 EIF2B5Q13144 721 aaKnown RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 PDE1CQ14123 709 aaPredicted RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 POU6F1Q14863 301 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 HLA-BQ31612 363 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 KCTD16Q68DU8 428 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 DUPD1Q68J44 220 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 RAET1GQ6H3X3 334 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 ADAMTSL4Q6UY14 1074 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 DBX2Q6ZNG2 339 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 MICALCLQ6ZW33 695 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 MAATS1Q7Z4T9 603 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 PTAR1Q7Z6K3 402 aaPredicted RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 PPIL6Q8IXY8 311 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 MMGT1Q8N4V1 131 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 TRAM1L1Q8N609 369 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 DNAAF3Q8N9W5 541 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 OR4K2Q8NGD2 314 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 OR13C4Q8NGS5 318 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 STYXQ8WUJ0 223 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 CDKN2AIPNLQ96HQ2 116 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 COX14Q96I36 57 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 ZNF778Q96MU6 729 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 PLEKHG4BQ96PX9 1271 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 RANBP9Q96S59 729 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 ELF4Q99607 663 aaPredicted RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 LRRC1Q9BTT6 524 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 CDH19Q9H159 772 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 GAREM1Q9H706 876 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A7Q9HAW7 530 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A10Q9HAW8 530 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 UGT1A8Q9HAW9 530 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 GDF3Q9NR23 364 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 RAD18Q9NS91 495 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 NLE1Q9NVX2 485 aaPredicted RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 ASIC3Q9UHC3 531 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 RIMKLBQ9ULI2 386 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
LINC01049-201ENST00000426840 SNX24Q9Y343 169 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 OR1A2Q9Y585 309 aa7.36□□□□□ -1.23
LINC01049-201ENST00000426840 SCN8AQ9UQD0 1980 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 ASCC3Q8N3C0 2202 aaKnown RBP7.35□□□□□ -1.23
LINC01049-201ENST00000426840 TMEM131Q92545 1883 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 A0A1B0GTQ1 180 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 AGAP14A8MT82 685 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 EFCAB8A8MWE9 144 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 H7C0S8 307 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 AP3B1O00203 1094 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 DFNA5O60443 496 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 PPFIA2O75334 1257 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 AVILO75366 819 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 SLC4A1P02730 911 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 CEACAM5P06731 702 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 MLNP12872 115 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 MPSTP25325 297 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 MGAT1P26572 445 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 COL8A1P27658 744 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 SPAM1P38567 509 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 MAGEA3P43357 314 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 RPL21P46778 160 aaKnown RBP7.35□□□□□ -1.23
LINC01049-201ENST00000426840 THOP1P52888 689 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 SESN2P58004 480 aaPredicted RBP7.35□□□□□ -1.23
LINC01049-201ENST00000426840 CRADDP78560 199 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 SARNPP82979 210 aaKnown RBP7.35□□□□□ -1.23
LINC01049-201ENST00000426840 TMPRSS15P98073 1019 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 CDK3Q00526 305 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 PDE1BQ01064 536 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 ACVR1Q04771 509 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 PEX6Q13608 980 aa7.35□□□□□ -1.23
LINC01049-201ENST00000426840 PTK2BQ14289 1009 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms