RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 MTSS1LQ765P7 747 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 PIWIL2Q8TC59 973 aaKnown RBP17.19■□□□□ 0.34
FN1-208ENST00000426059 PPP4R1Q8TF05 950 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 PLEKHG4BQ96PX9 1271 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 TMEM237Q96Q45 408 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 EBF4Q9BQW3 602 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 FAM83DQ9H4H8 585 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 SYTL2Q9HCH5 934 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 CD207Q9UJ71 328 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 COLQQ9Y215 455 aaPredicted RBP17.19■□□□□ 0.34
FN1-208ENST00000426059 STON1Q9Y6Q2 735 aa17.19■□□□□ 0.34
FN1-208ENST00000426059 NPEPPSL1A6NEC2 478 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 AGAP14A8MT82 685 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 UBXN8O00124 270 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 SLC25A14O95258 325 aaPredicted RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 TSPAN12O95859 305 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 ELFN1P0C7U0 828 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 ATP5F1P24539 256 aaPredicted RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 ACOX1Q15067 660 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 LRIT3Q3SXY7 679 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 ARL13AQ5H913 290 aaPredicted RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 TRIM67Q6ZTA4 783 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 DPPA4Q7L190 304 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 ZNF513Q8N8E2 541 aaPredicted RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 KDM1BQ8NB78 822 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 CSGALNACT1Q8TDX6 532 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 SREK1Q8WXA9 508 aaKnown RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 LINGO1Q96FE5 620 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 TTC1Q99614 292 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 RIOK2Q9BVS4 552 aaKnown RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 NCKIPSDQ9NZQ3 722 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 EPS15L1Q9UBC2 864 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 HEY2Q9UBP5 337 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 C2CD4DB7Z1M9 353 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 K7EQS6 105 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 SOX1O00570 391 aaPredicted RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.345e-11■□□□□ 9.8
FN1-208ENST00000426059 MPSTP25325 297 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 PPARGP37231 505 aaPredicted RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 EIF2DP41214 584 aaKnown RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 LIG3P49916 1009 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 C2orf27AQ580R0 203 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 IER5LQ5T953 404 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 VWA5B1Q5TIE3 1220 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 ERAP2Q6P179 960 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 MTDHQ86UE4 582 aaKnown RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 TMIEQ8NEW7 156 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 PRR11Q96HE9 360 aaPredicted RBP17.18■□□□□ 0.34
FN1-208ENST00000426059 C19orf43Q9BQ61 176 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 MYLK2Q9H1R3 596 aa17.18■□□□□ 0.34
FN1-208ENST00000426059 LRRC14BA6NHZ5 514 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 NCF1BA6NI72 391 aaPredicted RBP17.17■□□□□ 0.34
FN1-208ENST00000426059 NCF1CA8MVU1 366 aaPredicted RBP17.17■□□□□ 0.34
FN1-208ENST00000426059 BTN3A1O00481 513 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 IPO13O94829 963 aaKnown RBP17.17■□□□□ 0.34
FN1-208ENST00000426059 NCF1P14598 390 aaPredicted RBP17.17■□□□□ 0.34
FN1-208ENST00000426059 GM2AP17900 193 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 TSPAN8P19075 237 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 ITGB7P26010 798 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 SERPINB3P29508 390 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 COL19A1Q14993 1142 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 MAVSQ7Z434 540 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 CCDC91Q7Z6B0 441 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 ALYREFQ86V81 257 aaKnown RBP17.17■□□□□ 0.34
FN1-208ENST00000426059 LSMEM2Q8N112 164 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 PELI3Q8N2H9 469 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 ERP27Q96DN0 273 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 LRCH3Q96II8 777 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 COPS8Q99627 209 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 P2RY13Q9BPV8 354 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 GNPTGQ9UJJ9 305 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 PCDHB1Q9Y5F3 818 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 FADS2P1A8MWK0 482 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 ANHXE9PGG2 379 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 ADRB3P13945 408 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 IL2P60568 153 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 GPRC6AQ5T6X5 926 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 PPM1EQ8WY54 764 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 PPP1R36Q96LQ0 422 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 NECTIN4Q96NY8 510 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 ATOH8Q96SQ7 321 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 DERL2Q9GZP9 239 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 DRC3Q9H069 523 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 HEBP1Q9NRV9 189 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 ZDHHC3Q9NYG2 299 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 LIMD1Q9UGP4 676 aa17.17■□□□□ 0.34
FN1-208ENST00000426059 NEMP1O14524 444 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 SIX3O95343 332 aaPredicted RBP17.16■□□□□ 0.34
FN1-208ENST00000426059 MTHFD2P13995 350 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 PTPN5P54829 565 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 ILF2Q12905 390 aaKnown RBP17.16■□□□□ 0.34
FN1-208ENST00000426059 RCN2Q14257 317 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 PFKFB4Q16877 469 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 KHDC1Q4VXA5 237 aaKnown RBP17.16■□□□□ 0.34
FN1-208ENST00000426059 PIWIL4Q7Z3Z4 852 aaKnown RBP17.16■□□□□ 0.34
FN1-208ENST00000426059 TECPR1Q7Z6L1 1165 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 LRRC37BQ96QE4 947 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 UTP6Q9NYH9 597 aaKnown RBP17.16■□□□□ 0.34
FN1-208ENST00000426059 ZDHHC2Q9UIJ5 367 aa17.16■□□□□ 0.34
FN1-208ENST00000426059 RNF112Q9ULX5 631 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms