RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 PCDHA3Q9Y5H8 950 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 DUSP10Q9Y6W6 482 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 CFAP47Q6ZTR5 3102 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 LOC285095A0A1B0GVY8 99 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 OR5K4A6NMS3 321 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 EFCAB7A8K855 629 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 PDZK1P1A8MUH7 402 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 HACD1B0YJ81 288 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 C9orf172C9J069 976 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 K7ENP7 123 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 TK2O00142 265 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 KMOO15229 486 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 EFSO43281 561 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 DUX1O43812 170 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 VEGFDO43915 354 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A9O60656 530 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 AGTP01019 485 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 VIPP01282 170 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 PTMAP06454 111 aaKnown RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 LIPCP11150 499 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 ZNF7P17097 686 aaPredicted RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A6P19224 532 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A1P22309 533 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A4P22310 534 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A3P35503 534 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 CETN2P41208 172 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 CHRNA4P43681 627 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 FASLGP48023 281 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 GPLD1P80108 840 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 TMEM115Q12893 351 aaPredicted RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 SRSF6Q13247 344 aaKnown RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 SQSTM1Q13501 440 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 TRA2AQ13595 282 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP50-206ENST00000422489 GTF2H3Q13889 308 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 SLC14A2Q15849 920 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 PPP2R5EQ16537 467 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 MANEAQ5SRI9 462 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 DARS2Q6PI48 645 aaKnown RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 INO80CQ6PI98 192 aaPredicted RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 BBS12Q6ZW61 710 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 VASH2Q86V25 355 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 TRIM48Q8IWZ4 208 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 LSM14AQ8ND56 463 aaKnown RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 AGBL5Q8NDL9 886 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 CCDC112Q8NEF3 446 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 ART4Q93070 314 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 OXNAD1Q96HP4 312 aaPredicted RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 MRFAP1L1Q96HT8 127 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 QKIQ96PU8 341 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP50-206ENST00000422489 PLEKHG4BQ96PX9 1271 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 TAAR9Q96RI9 348 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 VAT1Q99536 393 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 FAM118BQ9BPY3 351 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 TBC1D10AQ9BXI6 508 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A7Q9HAW7 530 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A10Q9HAW8 530 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 UGT1A8Q9HAW9 530 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 SARS2Q9NP81 518 aaKnown RBP9.17□□□□□ -0.94
NUP50-206ENST00000422489 OCIAD1Q9NX40 245 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 CPNE7Q9UBL6 633 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 TRHDEQ9UKU6 1024 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 APC2O95996 2303 aa9.17□□□□□ -0.94
NUP50-206ENST00000422489 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 KIR2DS5A0A0G2JLQ3 304 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 A0A0G2JNG1 304 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 APOC4-APOC2K7ER74 178 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 KIR2DS3K7RE56 304 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 ERVH48-1M5A8F1 160 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 HGSO14964 777 aaPredicted RBP9.16□□□□□ -0.94
NUP50-206ENST00000422489 EPOP01588 193 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 APOC2P02655 101 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 F3P13726 295 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 TYRP1P17643 537 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 AMD1P17707 334 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 IDSP22304 550 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 RPL10P27635 214 aaKnown RBP9.16□□□□□ -0.94
NUP50-206ENST00000422489 CSF2RBP32927 897 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 DRG2P55039 364 aaKnown RBP9.16□□□□□ -0.94
NUP50-206ENST00000422489 RWDD2BP57060 319 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 DCDC1P59894 354 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 EIF3EP60228 445 aaKnown RBP9.16□□□□□ -0.94
NUP50-206ENST00000422489 COPS2P61201 443 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 OTUD4Q01804 1114 aaKnown RBP9.16□□□□□ -0.94
NUP50-206ENST00000422489 MPP3Q13368 585 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 XRCC4Q13426 336 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 LY6DQ14210 128 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 PRPSAP1Q14558 356 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 KIR2DS5Q14953 304 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 SLC1A5Q15758 541 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 CHRNA6Q15825 494 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 ATP13A5Q4VNC0 1218 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 PDPK2PQ6A1A2 396 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 AADACL2Q6P093 401 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 FAM151BQ6UXP7 276 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 RAD9BQ6WBX8 426 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 GLT6D1Q7Z4J2 308 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 KIAA1328Q86T90 577 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms