RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CHRNGP07510 517 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 ARHGEF7Q14155 803 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 ITPRIPL2Q3MIP1 535 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 CYB5D1Q6P9G0 228 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 Q7L0L9 218 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 MAVSQ7Z434 540 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 CLDN19Q8N6F1 224 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 SREK1Q8WXA9 508 aaKnown RBP20.77■□□□□ 0.92
GPC1-202ENST00000420138 TFB2MQ9H5Q4 396 aaKnown RBP20.77■□□□□ 0.92
GPC1-202ENST00000420138 UBE2ZQ9H832 354 aaPredicted RBP20.77■□□□□ 0.92
GPC1-202ENST00000420138 CRLS1Q9UJA2 301 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 GRXCR2A6NFK2 248 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 ANHXE9PGG2 379 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 UNC5CO95185 931 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 MTHFD2P13995 350 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 CHRM3P20309 590 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 MMP12P39900 470 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 GRIA2P42262 883 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 SOX9P48436 509 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 ELAVL3Q14576 367 aaKnown RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 ZDHHC20Q5W0Z9 365 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 EGFLAMQ63HQ2 1017 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 SERPINA13PQ6UXR4 307 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 ZNF781Q8N8C0 355 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 RHEBL1Q8TAI7 183 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 LKAAEAR1Q8TD35 194 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 OR8D1Q8WZ84 308 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 ARRDC3Q96B67 414 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 KLHL29Q96CT2 875 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 ATOH8Q96SQ7 321 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 CDX2Q99626 313 aaPredicted RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 CD84Q9UIB8 345 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 KPNA3O00505 521 aaPredicted RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 IPO13O94829 963 aaKnown RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 NQO1P15559 274 aaKnown RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 GM2AP17900 193 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 PPARGP37231 505 aaPredicted RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 AQP5P55064 265 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 B4GALNT1Q00973 533 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 HTR4Q13639 388 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 RCN2Q14257 317 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 ARL13AQ5H913 290 aaPredicted RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 Q6ZVL8 140 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 PIP4K2CQ8TBX8 421 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 KIAA1191Q96A73 305 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 TMEM237Q96Q45 408 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 CLPBQ9H078 707 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 PKD2L2Q9NZM6 624 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 TRMT6Q9UJA5 497 aaKnown RBP20.76■□□□□ 0.91
GPC1-202ENST00000420138 HAO1Q9UJM8 370 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 ITM2BQ9Y287 266 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 DHRS7Q9Y394 339 aa20.76■□□□□ 0.91
GPC1-202ENST00000420138 IGLV3-16A0A075B6K0 115 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 HSPA4LO95757 839 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 ALOX15P16050 662 aaPredicted RBP20.75■□□□□ 0.91
GPC1-202ENST00000420138 ITGB7P26010 798 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 DCDC1P59894 354 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 ELF3P78545 371 aaPredicted RBP20.75■□□□□ 0.91
GPC1-202ENST00000420138 MACC1Q6ZN28 852 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 TRIM67Q6ZTA4 783 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 ASRGL1Q7L266 308 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 TECPR1Q7Z6L1 1165 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 NKAPQ8N5F7 415 aaKnown RBP20.75■□□□□ 0.91
GPC1-202ENST00000420138 PPP4R1Q8TF05 950 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 EEF1AKMT1Q8WVE0 214 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 UCMAQ8WVF2 138 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 SCAMP4Q969E2 229 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 SKA1Q96BD8 255 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 TTC1Q99614 292 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 CYP4F12Q9HCS2 524 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 ZDHHC3Q9NYG2 299 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 NFKBIL1Q9UBC1 381 aaPredicted RBP20.75■□□□□ 0.91
GPC1-202ENST00000420138 HEY2Q9UBP5 337 aa20.75■□□□□ 0.91
GPC1-202ENST00000420138 ETV3P41162 512 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 ATP6V0D1P61421 351 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 NFKB2Q00653 900 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 SMAD4Q13485 552 aaKnown RBP20.74■□□□□ 0.91
GPC1-202ENST00000420138 ENPP2Q13822 863 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 LIPIQ6XZB0 460 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 CPNE9Q8IYJ1 553 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 DTX3LQ8TDB6 740 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 EZH1Q92800 747 aaPredicted RBP20.74■□□□□ 0.91
GPC1-202ENST00000420138 CCDC126Q96EE4 140 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 EBF4Q9BQW3 602 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 PRSS16Q9NQE7 514 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 ARHGEF3Q9NR81 526 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 CACNA2D2Q9NY47 1150 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 GNPTGQ9UJJ9 305 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 ZFP69BQ9UJL9 534 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 E5RI56 91 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 CDC7O00311 574 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 MBTPS2O43462 519 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 NPHS1O60500 1241 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 FOSL2P15408 326 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 PTRHD1Q6GMV3 140 aaKnown RBP20.74■□□□□ 0.91
GPC1-202ENST00000420138 PIWIL4Q7Z3Z4 852 aaKnown RBP20.74■□□□□ 0.91
GPC1-202ENST00000420138 MTDHQ86UE4 582 aaKnown RBP20.74■□□□□ 0.91
GPC1-202ENST00000420138 WDR75Q8IWA0 830 aaKnown RBP20.74■□□□□ 0.91
GPC1-202ENST00000420138 SIKE1Q9BRV8 207 aa20.74■□□□□ 0.91
GPC1-202ENST00000420138 ABCG8Q9H221 673 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms