RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 SPRY4Q9C004 299 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 TRIM39Q9HCM9 518 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 PRDM8Q9NQV8 689 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 RAD18Q9NS91 495 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 KLC4Q9NSK0 619 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 SHOC2Q9UQ13 582 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 ADGRG1Q9Y653 693 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 APOL1O14791 398 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 POLR1CO15160 346 aaPredicted RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 ARHGAP6O43182 974 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 STK17BO94768 372 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 TPM3P06753 285 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 TMEM253P0C7T8 217 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 UBE2IP63279 158 aaKnown RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 KCNAB2Q13303 367 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 PDK1Q15118 436 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 PCSK7Q16549 785 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 INSCQ1MX18 579 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 ZNF648Q5T619 568 aaPredicted RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 PDPK2PQ6A1A2 396 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 SLC9A4Q6AI14 798 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 CRTC3Q6UUV7 619 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 NT5DC3Q86UY8 548 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 TRIM48Q8IWZ4 208 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 TRAM1L1Q8N609 369 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 GLYATL1Q969I3 302 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 COL26A1Q96A83 441 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 IMP4Q96G21 291 aaKnown RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 PLEKHG4BQ96PX9 1271 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 GPR63Q9BZJ6 419 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 TRIT1Q9H3H1 467 aaKnown RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 MAGEE1Q9HCI5 957 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 APMAPQ9HDC9 416 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 NFKBIL1Q9UBC1 381 aaPredicted RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 TUBD1Q9UJT1 453 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 ZNF711Q9Y462 761 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 TMEM184BQ9Y519 407 aaPredicted RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 MN1Q10571 1320 aaPredicted RBP14.24□□□□□ -0.13
PAF1-202ENST00000416728 MYO18BQ8IUG5 2567 aa14.24□□□□□ -0.13
PAF1-202ENST00000416728 LOC101059948A0A1B0GTJ6 334 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 PDZK1P1A8MUH7 402 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 PPP1R12AO14974 1030 aaPredicted RBP14.23□□□□□ -0.13
PAF1-202ENST00000416728 CHUKO15111 745 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 NKX2-8O15522 239 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 VIPP01282 170 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 ANKRD34CP0C6C1 535 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 PRKAR1AP10644 381 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 CDK18Q07002 472 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 ABHD18Q0P651 414 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 PLA2G4EQ3MJ16 856 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 TIPARPQ7Z3E1 657 aaKnown RBP14.23□□□□□ -0.13
PAF1-202ENST00000416728 TMC3Q7Z5M5 1100 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 ADGRG6Q86SQ4 1221 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 LRRTM4Q86VH4 590 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 VSIG1Q86XK7 387 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 UNC5BQ8IZJ1 945 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 SLC25A51Q9H1U9 297 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 UCK1Q9HA47 277 aa14.23□□□□□ -0.13
PAF1-202ENST00000416728 SSU72P8A0A1W2PR75 194 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 C3orf70A6NLC5 250 aaPredicted RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 KMOO15229 486 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 AKR1B10O60218 316 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 KRT1P04264 644 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 ZFXP17010 805 aaPredicted RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 TYRP1P17643 537 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 XRCC1P18887 633 aaPredicted RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 GFERP55789 205 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 TLE1Q04724 770 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 FOXM1Q08050 763 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 CDC20Q12834 499 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 SEPT7Q16181 437 aaKnown RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 ASTE1Q2TB18 679 aaPredicted RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 ODF2Q5BJF6 829 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 FAM182AQ5T1J6 154 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 CCDC70Q6NSX1 233 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 NPNTQ6UXI9 565 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 TMEM26Q6ZUK4 368 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 PTRH1Q86Y79 214 aaKnown RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 ESX1Q8N693 406 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 OR8K1Q8NGG5 319 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 SLC35G2Q8TBE7 412 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 C9orf72Q96LT7 481 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 OLFM3Q96PB7 478 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 XPO4Q9C0E2 1151 aaKnown RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 BRD8Q9H0E9 1235 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 ZNHIT6Q9NWK9 470 aaKnown RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 SIDT1Q9NXL6 827 aaKnown RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 SCHIP1Q9P0W5 487 aaPredicted RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 SLC23A2Q9UGH3 650 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 DNAJC16Q9Y2G8 782 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 TLN1Q9Y490 2541 aaKnown RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 VEGFDO43915 354 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 MTX2O75431 263 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 UBXN7O94888 489 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 CDK14O94921 469 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 NDST3O95803 873 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 DLGAP3O95886 979 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 C9P02748 559 aa14.22□□□□□ -0.13
PAF1-202ENST00000416728 ZNF7P17097 686 aaPredicted RBP14.22□□□□□ -0.13
PAF1-202ENST00000416728 BPIP17213 487 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms