RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NEK5Q6P3R8 708 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 FKBP9P1Q75LS8 142 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 STRADAQ7RTN6 431 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 RYBPQ8N488 228 aaPredicted RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 LEMD2Q8NC56 503 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 PIK3C3Q8NEB9 887 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 PROX1Q92786 737 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 TMEM246Q9BRR3 403 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 FAM49AQ9H0Q0 323 aaPredicted RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 SP140LQ9H930 580 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 FBXO8Q9NRD0 319 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 FAM118AQ9NWS6 357 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 DPYSL4O14531 572 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 UBFD1O14562 309 aaKnown RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 MAFO75444 373 aaPredicted RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ALPLP05186 524 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 PRKACGP22612 351 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 IFNA8P32881 189 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 HADHAP40939 763 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 MTHFRP42898 656 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 SOWAHAQ2M3V2 549 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 TTC23Q5W5X9 447 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLC38A6Q8IZM9 456 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 MINDY1Q8N5J2 469 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 C2orf69Q8N8R5 385 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZNF560Q96MR9 790 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 YME1L1Q96TA2 773 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 NIFKQ9BYG3 293 aaKnown RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 SMOC2Q9H3U7 446 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 BBIP1A8MTZ0 92 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLC1A7O00341 560 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 PPP6CO00743 305 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 GABARAPO95166 117 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 NFKB1P19838 968 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 PTPN3P26045 913 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 KCNAB2Q13303 367 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 PSMD5Q16401 504 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 SMU1Q2TAY7 513 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 LCLAT1Q6UWP7 414 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 CYHR1Q6ZMK1 362 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 MCOLN3Q8TDD5 553 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 RNF139Q8WU17 664 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 NSMCE2Q96MF7 247 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 COQ7Q99807 217 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 FEM1AQ9BSK4 669 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 NT5C1AQ9BXI3 368 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 TMEM134Q9H6X4 195 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 A0A087WZ62 844 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 TCRBV5S2A0A599 114 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 HS6ST1O60243 411 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 FADS2O95864 444 aaKnown RBP14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 FMO3P31513 532 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 RBM20Q5T481 1227 aaKnown RBP14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZNF470Q6ECI4 717 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 TXNDC11Q6PKC3 985 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 SPESP1Q6UW49 350 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 GPR142Q7Z601 462 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZHX1-C8orf76Q96EF9 292 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 HSFY1Q96LI6 401 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 FDXACB1Q9BRP7 624 aaPredicted RBP14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 OR2B2Q9GZK3 357 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 NTN4Q9HB63 628 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 PLSCR3Q9NRY6 295 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 ERVK-18Q9QC07 812 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 INVSQ9Y283 1065 aa14.61□□□□□ -0.07
NCKIPSD-204ENST00000416649 MAGEB16A2A368 324 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 LACTBL1A8MY62 500 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 G3V2T6 193 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 LINC00032P0C843 101 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 HGFP14210 728 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 ADORA2BP29275 332 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 IL12AP29459 219 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 KRT6CP48668 564 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 OR4D2P58180 307 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 CDC20Q12834 499 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZFP69Q49AA0 526 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 GLYATQ6IB77 296 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 MICU2Q8IYU8 434 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 FAR1Q8WVX9 515 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 TP53INP1Q96A56 240 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 TMEM125Q96AQ2 219 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 BTN2A3PQ96KV6 586 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 TTYH2Q9BSA4 534 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 MLPHQ9BV36 600 aaPredicted RBP14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 CASS4Q9NQ75 786 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 H0Y626 953 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 PIP5K1BO14986 540 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 TRIM16O95361 564 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 LGALS2P05162 132 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 ABCB1P08183 1280 aaPredicted RBP14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 FMO4P31512 558 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 GLUD2P49448 558 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 CLK1P49759 484 aaKnown RBP14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 DIO3P55073 304 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 GNG2P59768 71 aa14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 PITX1P78337 314 aaPredicted RBP14.6□□□□□ -0.07
NCKIPSD-204ENST00000416649 BST2Q10589 180 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms