RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EPOP01588 193 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 SLC4A1P02730 911 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 BPIP17213 487 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 MPSTP25325 297 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 CD68P34810 354 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 CYLC1P35663 651 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 TNNT3P45378 269 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 EPHA4P54764 986 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 WASHC5Q12768 1159 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 NFATC2Q13469 925 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 LLGL1Q15334 1064 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 ZNF648Q5T619 568 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 WDR74Q6RFH5 385 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 PID1Q7Z2X4 250 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 SGF29Q96ES7 293 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 RBM41Q96IZ5 413 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 PLEKHG4BQ96PX9 1271 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 EPB41L1Q9H4G0 881 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 TRABDQ9H4I3 376 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 KLC4Q9NSK0 619 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 UBP1Q9NZI7 540 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 TMEM9Q9P0T7 183 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 KLHL8Q9P2G9 620 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 STMND1H3BQB6 276 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 KMOO15229 486 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 VEGFDO43915 354 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 NFKB1P19838 968 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 HMGCLP35914 325 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 WNT3AP56704 352 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 ZDHHC20Q5W0Z9 365 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 C11orf63Q6NUN7 778 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 KDELC1Q6UW63 502 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 ZNF605Q86T29 641 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 LRRTM4Q86VH4 590 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 ZC3H18Q86VM9 953 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 CCDC50Q8IVM0 306 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 VPS35Q96QK1 796 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 FCRL5Q96RD9 977 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 DDA1Q9BW61 102 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 ASPSCR1Q9BZE9 553 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 GOLPH3Q9H4A6 298 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 BPIFA1Q9NP55 256 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 PRDM8Q9NQV8 689 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 SLC39A1Q9NY26 324 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 CPNE7Q9UBL6 633 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 SPO11Q9Y5K1 396 aa17.36■□□□□ 0.37
PDLIM2-208ENST00000416159 B4E171 279 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 AURKAO14965 403 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 CDK14O94921 469 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 ZNF7P17097 686 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 XRCC1P18887 633 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 TSPAN7P41732 249 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 ATP1A2P50993 1020 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 RAB15P59190 212 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 ADCY2Q08462 1091 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 SRSF6Q13247 344 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 LY6DQ14210 128 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 PPP2R5EQ16537 467 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 INSCQ1MX18 579 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 XKR5Q6UX68 686 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 ARHGAP22Q7Z5H3 698 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 ZNF567Q8N184 647 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 ZSCAN1Q8NBB4 408 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 DTX3LQ8TDB6 740 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 HTR3CQ8WXA8 447 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 NCSTNQ92542 709 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 ART4Q93070 314 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 CALR3Q96L12 384 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 TIMM29Q9BSF4 260 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 OSGEPL1Q9H4B0 414 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 UCK1Q9HA47 277 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 OCIAD1Q9NX40 245 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 HACD3Q9P035 362 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 TRHDEQ9UKU6 1024 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 SDK2Q58EX2 2172 aa17.35■□□□□ 0.37
PDLIM2-208ENST00000416159 SMG1Q96Q15 3661 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 LILRA5A6NI73 299 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 EFCAB7A8K855 629 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 UBE2IP63279 158 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 MPP3Q13368 585 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 XRCC4Q13426 336 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 SNAP47Q5SQN1 464 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 CRTC3Q6UUV7 619 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 BBS12Q6ZW61 710 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 DAAM2Q86T65 1068 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 VASH2Q86V25 355 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 FAM129CQ86XR2 697 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 BRSK1Q8TDC3 778 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 HAUS1Q96CS2 278 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 MED8Q96G25 268 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 MRGPRX2Q96LB1 330 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 QKIQ96PU8 341 aaKnown RBP eCLIP17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 TEFMQ96QE5 360 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 SEMA4CQ9C0C4 833 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 SLC23A2Q9UGH3 650 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 B3GALT1Q9Y5Z6 326 aa17.34■□□□□ 0.37
PDLIM2-208ENST00000416159 A8MU76 341 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 APOC4-APOC2K7ER74 178 aa17.33■□□□□ 0.36
PDLIM2-208ENST00000416159 MTX2O75431 263 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms