RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 FAM58BPP0C7Q3 252 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 LPOP22079 712 aaPredicted RBP11.5□□□□□ -0.57
RFFL-205ENST00000415395 NNMTP40261 264 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 FCHO2Q0JRZ9 810 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 STX5Q13190 355 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 CARD16Q5EG05 197 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 DGKKQ5KSL6 1271 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 ZNF470Q6ECI4 717 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 B3GNT6Q6ZMB0 384 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 ETFBKMTQ8IXQ9 262 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 TNS4Q8IZW8 715 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 HIC2Q96JB3 615 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 ZNF641Q96N77 438 aaPredicted RBP11.5□□□□□ -0.57
RFFL-205ENST00000415395 PRO3102Q9H379 93 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 WDR41Q9HAD4 459 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 EVLQ9UI08 416 aaPredicted RBP11.5□□□□□ -0.57
RFFL-205ENST00000415395 FBXO5Q9UKT4 447 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 ERVW-1Q9UQF0 538 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 DMTF1Q9Y222 760 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 A0A087X1B8 175 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 CCDC78A2IDD5 438 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 CAPN8A6NHC0 703 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 WASH3PC4AMC7 463 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 H7C0S8 307 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 TRIM38O00635 465 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 BCAS2O75934 225 aaPredicted RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 PIGNO95427 931 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 POP4O95707 220 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 OGNP20774 298 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 PMLP29590 882 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 MTHFRP42898 656 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 SLC1A2P43004 574 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 CTSOP43234 321 aaPredicted RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 LEPRP48357 1165 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 CD151P48509 253 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 USP10Q14694 798 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 EIF4HQ15056 248 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 ZNF423Q2M1K9 1284 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 MYLK3Q32MK0 819 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 LSM12Q3MHD2 195 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 PIGGQ5H8A4 983 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 NXNQ6DKJ4 435 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 MRNIPQ6NTE8 343 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 AFTPHQ6ULP2 937 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 RNF111Q6ZNA4 994 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 PIWIL4Q7Z3Z4 852 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 CILP2Q8IUL8 1156 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 MFSD6LQ8IWD5 586 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 KDM1BQ8NB78 822 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 PIH1D2Q8WWB5 315 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 HDAC10Q969S8 669 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ASIC4Q96FT7 647 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 RPL10LQ96L21 214 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 CDRT15Q96T59 188 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 EFHD1Q9BUP0 239 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 MRPL1Q9BYD6 325 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 S1PR5Q9H228 398 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 EML4Q9HC35 981 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 NCKIPSDQ9NZQ3 722 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 SLC39A10Q9ULF5 831 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ACOT9Q9Y305 439 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ARL5AQ9Y689 179 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 SCN8AQ9UQD0 1980 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 RANBP2P49792 3224 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 GOLGA8TH3BQL2 631 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 AHSGP02765 367 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 TFEBP19484 476 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 POU3F3P20264 500 aaPredicted RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 MPSTP25325 297 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ARRB2P32121 409 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 RECQLP46063 649 aaPredicted RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 STK19P49842 368 aaPredicted RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 CSRP3P50461 194 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 CLCN5P51795 746 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 NR1H2P55055 460 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 DLG2Q15700 870 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 BORAQ6PGQ7 559 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 NAPRTQ6XQN6 538 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 PLD6Q8N2A8 252 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 CPA6Q8N4T0 437 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 MDGA1Q8NFP4 955 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 OR6P1Q8NGX9 317 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 CEP70Q8NHQ1 597 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 TRPC4APQ8TEL6 797 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ELSPBP1Q96BH3 223 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 RCN3Q96D15 328 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ECHDC3Q96DC8 303 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ATXN7L3BQ96GX2 97 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 CDKN2AIPNLQ96HQ2 116 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 DNAJC1Q96KC8 554 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 OR52B2Q96RD2 323 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 LYSMD1Q96S90 227 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 APOL5Q9BWW9 433 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 ZBTB26Q9HCK0 441 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 CLEC1BQ9P126 229 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 SUCOQ9UBS9 1254 aaKnown RBP11.49□□□□□ -0.57
RFFL-205ENST00000415395 PPIL1Q9Y3C6 166 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms