RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 TRIM71Q2Q1W2 868 aaKnown RBP9.79□□□□□ -0.84
SS18-203ENST00000415083 IFNEQ86WN2 208 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 BBS5Q8N3I7 341 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 PACRGLQ8N7B6 248 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 ATAD1Q8NBU5 361 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 OR4L1Q8NH43 312 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 TBC1D15Q8TC07 691 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 HBEGFQ99075 208 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 ADAM2Q99965 735 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 DCUN1D5Q9BTE7 237 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 IKZF5Q9H5V7 419 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 ZNHIT2Q9UHR6 403 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 Q9Y3F1 56 aa9.79□□□□□ -0.84
SS18-203ENST00000415083 A0A1W2PPW3 197 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 INPP4BO15327 924 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 GLP2RO95838 553 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 C1QCP02747 245 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CYBBP04839 570 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 LBPP18428 481 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 DCKP27707 260 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 KCNQ1P51787 676 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 ERVPABLB-1P60509 514 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 IL10RBQ08334 325 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 LCP2Q13094 533 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 IRF5Q13568 498 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 MBTPS1Q14703 1052 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 ADRM1Q16186 407 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 AARS2Q5JTZ9 985 aaKnown RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 KRT80Q6KB66 452 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 LETMD1Q6P1Q0 360 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 MIB1Q86YT6 1006 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 LRRC49Q8IUZ0 686 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 SFRP1Q8N474 314 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 TMEM199Q8N511 208 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 SIDT2Q8NBJ9 832 aaKnown RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 ITFG2Q969R8 447 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 GPR21Q99679 349 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 DERL2Q9GZP9 239 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CCSER2Q9H7U1 834 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 MRPL40Q9NQ50 206 aaKnown RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.78□□□□□ -0.84
SS18-203ENST00000415083 FNIP2Q9P278 1114 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CCL27Q9Y4X3 112 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CASP8AP2Q9UKL3 1982 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 IQCF5A8MTL0 148 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 NIPSNAP2O75323 286 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 PRSS23O95084 383 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CD160O95971 181 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 DCTN2Q13561 401 aaKnown RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 CYP51A1Q16850 503 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 TRAF7Q6Q0C0 670 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 Q6ZNX1 250 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 MON1AQ86VX9 555 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 RALGPS2Q86X27 583 aaPredicted RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 FNDC8Q8TC99 324 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 BRSK1Q8TDC3 778 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 EXOC2Q96KP1 924 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 TDRD1Q9BXT4 1180 aaKnown RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 POPDC3Q9HBV1 291 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CATSPERZQ9NTU4 200 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 NLE1Q9NVX2 485 aaPredicted RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 PCDHGA11Q9Y5H2 935 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 ZNF106Q9H2Y7 1883 aaKnown RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CR2P20023 1033 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 IST1P53990 364 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 YWHAHQ04917 246 aaPredicted RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 DSC1Q08554 894 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CBX2Q14781 532 aaPredicted RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 METTL23Q86XA0 190 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CAMK1DQ8IU85 385 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 HS3ST5Q8IZT8 346 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 DTWD1Q8N5C7 304 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 PCYOX1LQ8NBM8 494 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 OR7D4Q8NG98 312 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 SLC22A17Q8WUG5 538 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 EEF1AKMT1Q8WVE0 214 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 WBP2Q969T9 261 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 HAUS8Q9BT25 410 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 KATNAL1Q9BW62 490 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 AP5M1Q9H0R1 490 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CHCHD3Q9NX63 227 aaKnown RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 TUBA8Q9NY65 449 aaPredicted RBP9.78□□□□□ -0.84
SS18-203ENST00000415083 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 CORINQ9Y5Q5 1042 aa9.78□□□□□ -0.84
SS18-203ENST00000415083 INPPL1O15357 1258 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 OAZ2O95190 189 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 HNRNPCP07910 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
SS18-203ENST00000415083 TYMPP19971 482 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 EMX2Q04743 252 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 DPY19L1Q2PZI1 675 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 TIGD2Q4W5G0 525 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 COQ5Q5HYK3 327 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 GNASQ5JWF2 1037 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 C6orf136Q5SQH8 315 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 MSRB3Q8IXL7 192 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 CHPFQ8IZ52 775 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 OR4K2Q8NGD2 314 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 CD200R1Q8TD46 325 aa9.77□□□□□ -0.85
SS18-203ENST00000415083 PPP1R2P1Q96PQ5 205 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms