RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CLCQ05315 142 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 LRRC32Q14392 662 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 C10orf62Q5T681 223 aaPredicted RBP11.88□□□□□ -0.51
PTPRF-205ENST00000414879 LRRC74BQ6ZQY2 392 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 CEP68Q76N32 757 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 CACUL1Q86Y37 369 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 GPR135Q8IZ08 494 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 Q96MT0 163 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 TEFMQ96QE5 360 aaKnown RBP11.88□□□□□ -0.51
PTPRF-205ENST00000414879 LRMDAQ9H2I8 198 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 USP29Q9HBJ7 922 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 SGK2Q9HBY8 427 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 MTRRQ9UBK8 725 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
PTPRF-205ENST00000414879 NPEPPSL1A6NEC2 478 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 NMBRP28336 390 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 SERPINB1P30740 379 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 VIPR1P32241 457 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 CPTPQ5TA50 214 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 LINGO4Q6UY18 593 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 SLC39A5Q6ZMH5 540 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 DEPDC4Q8N2C3 294 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 UMODL1-AS1Q8N2C9 162 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 BANPQ8N9N5 519 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 OR6K2Q8NGY2 324 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 AZIN2Q96A70 460 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 NXNL1Q96CM4 212 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 SEPHS2Q99611 448 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 CAPN10Q9HC96 672 aa11.88□□□□□ -0.51
PTPRF-205ENST00000414879 TCHHQ07283 1943 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 H3BNH8 94 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 OR10H2O60403 315 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 ERN1O75460 977 aaKnown RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 ALPPL2P10696 532 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 SOX11P35716 441 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 RFX3P48380 749 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 RASSF5Q8WWW0 418 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 PANX1Q96RD7 426 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 TMEM79Q9BSE2 394 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 DUSP12Q9UNI6 340 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 SAMD4AQ9UPU9 718 aaKnown RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 NR2E1Q9Y466 385 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 M0QZQ0 153 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 SNAP91O60641 907 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 LYPLA1O75608 230 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 MT-CYBP00156 380 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 IMPDH2P12268 514 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 CRATP43155 626 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 TMED1Q13445 227 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 SLC1A5Q15758 541 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 CRTC3Q6UUV7 619 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 TPRG1Q6ZUI0 275 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 RAB7BQ96AH8 199 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 ROPN1LQ96C74 230 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 RMND5BQ96G75 393 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 TOX2Q96NM4 488 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 OR52E6Q96RD3 313 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 DLGAP2Q9P1A6 1054 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 SLC17A7Q9P2U7 560 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 FKBPLQ9UIM3 349 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 FAM159BA6NKW6 160 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 INPPL1O15357 1258 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 AP2A2O94973 939 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 CLPTM1O96005 669 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 SRPRAP08240 638 aaKnown RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 ERFP50548 548 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 TIMM50Q3ZCQ8 353 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 VITQ6UXI7 678 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 STK32CQ86UX6 486 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 CPSF7Q8N684 471 aaKnown RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 CDCA3Q99618 268 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 TNKS2Q9H2K2 1166 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 IMP3Q9NV31 184 aaKnown RBP11.87□□□□□ -0.51
PTPRF-205ENST00000414879 TELO2Q9Y4R8 837 aa11.87□□□□□ -0.51
PTPRF-205ENST00000414879 FFAR3O14843 346 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 GPR42O15529 346 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 HLA-DQB2P05538 268 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 UMPSP11172 480 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 GNAZP19086 355 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
PTPRF-205ENST00000414879 HNF4AP41235 474 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 SSR2P43308 183 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 KIR3DL1P43629 444 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 STXBP1P61764 594 aaKnown RBP11.86□□□□□ -0.51
PTPRF-205ENST00000414879 GSTM4Q03013 218 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 EIF4HQ15056 248 aaKnown RBP11.86□□□□□ -0.51
PTPRF-205ENST00000414879 DEPDC1Q5TB30 811 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 KHDRBS2Q5VWX1 349 aaKnown RBP11.86□□□□□ -0.51
PTPRF-205ENST00000414879 NEK5Q6P3R8 708 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 ZDHHC24Q6UX98 284 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 TIFABQ6ZNK6 161 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 C16orf62Q7Z3J2 963 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 NECTIN4Q96NY8 510 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 CCSER2Q9H7U1 834 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 IPPKQ9H8X2 491 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 SFXN1Q9H9B4 322 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 A0A087WXM4 84 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 GSAPA4D1B5 854 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 METTL18O95568 372 aa11.86□□□□□ -0.51
PTPRF-205ENST00000414879 BUD31P41223 144 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms