RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ACADVLP49748 655 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 CLCNKAP51800 687 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 SESN2P58004 480 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-206ENST00000414829 ACTR1AP61163 376 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 XIAPP98170 497 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 GSTM4Q03013 218 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 TMEM115Q12893 351 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-206ENST00000414829 BIRC2Q13490 618 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 WHAMMP3Q1A5X7 153 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 ZRANB3Q5FWF4 1079 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 CERCAMQ5T4B2 595 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 CERS6Q6ZMG9 384 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 ADGRG6Q86SQ4 1221 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 JAMLQ86YT9 394 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 NXPE1Q8N323 547 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 MPP5Q8N3R9 675 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 BBOF1Q8ND07 529 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 FAM46DQ8NEK8 389 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 SPATA4Q8NEY3 305 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 CPT1BQ92523 772 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 COPS8Q99627 209 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 DPEP2Q9H4A9 486 aa14.47□□□□□ -0.09
LIMS1-206ENST00000414829 SUDS3Q9H7L9 328 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-206ENST00000414829 PIH1D1Q9NWS0 290 aaKnown RBP14.47□□□□□ -0.09
LIMS1-206ENST00000414829 DNMT3AQ9Y6K1 912 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-206ENST00000414829 ASCC3Q8N3C0 2202 aaKnown RBP14.46□□□□□ -0.09
LIMS1-206ENST00000414829 FAM187AA6NFU0 413 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 AGAP14A8MT82 685 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 FANCGO15287 622 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 GIMD1P0DJR0 217 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 ZNF8P17098 575 aaPredicted RBP14.46□□□□□ -0.09
LIMS1-206ENST00000414829 GRIA1P42261 906 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 CTBSQ01459 385 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 ACVR1Q04771 509 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 ITIH4Q14624 930 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 MORF4L2Q15014 288 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 INSCQ1MX18 579 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 DNAJC21Q5F1R6 531 aaKnown RBP14.46□□□□□ -0.09
LIMS1-206ENST00000414829 SLC30A9Q6PML9 568 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 ZNF572Q7Z3I7 529 aaPredicted RBP14.46□□□□□ -0.09
LIMS1-206ENST00000414829 GALNT15Q8N3T1 639 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 MNS1Q8NEH6 495 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 KIF18AQ8NI77 898 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 GABPB2Q8TAK5 448 aaPredicted RBP14.46□□□□□ -0.09
LIMS1-206ENST00000414829 ADAMTS14Q8WXS8 1223 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 CDKN2AIPNLQ96HQ2 116 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 TAAR2Q9P1P5 351 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 CDC23Q9UJX2 597 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 ANAPC5Q9UJX4 755 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 KCTD3Q9Y597 815 aa14.46□□□□□ -0.09
LIMS1-206ENST00000414829 CABIN1Q9Y6J0 2220 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 TRBV5-4A0A0C4DH59 114 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 EME2A4GXA9 379 aaPredicted RBP14.45□□□□□ -0.1
LIMS1-206ENST00000414829 SDR42E2A6NKP2 422 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 OR5K4A6NMS3 321 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 B4DGG1 531 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
LIMS1-206ENST00000414829 GIPC1O14908 333 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A9O60656 530 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 DKK1O94907 266 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 ADRB1P08588 477 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 ACP5P13686 325 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A6P19224 532 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A1P22309 533 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A4P22310 534 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 ACRV1P26436 265 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A3P35503 534 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A5P35504 534 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 TMPRSS15P98073 1019 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 BCL7AQ4VC05 210 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 C14orf28Q4W4Y0 310 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 CCDC38Q502W7 563 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 RNASEH2BQ5TBB1 312 aaKnown RBP14.45□□□□□ -0.1
LIMS1-206ENST00000414829 CASC4Q6P4E1 433 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 OGFOD3Q6PK18 319 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 CRTC3Q6UUV7 619 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 CHST15Q7LFX5 561 aaPredicted RBP14.45□□□□□ -0.1
LIMS1-206ENST00000414829 TAS2R42Q7RTR8 314 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 SLC35F3Q8IY50 421 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 NAT8LQ8N9F0 302 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 ZDHHC1Q8WTX9 485 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 SNF8Q96H20 258 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 SERPINB12Q96P63 405 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 NAT9Q9BTE0 207 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 KIFC1Q9BW19 673 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A7Q9HAW7 530 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A10Q9HAW8 530 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 UGT1A8Q9HAW9 530 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 ZDHHC3Q9NYG2 299 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 PADI4Q9UM07 663 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 SOX13Q9UN79 622 aa14.45□□□□□ -0.1
LIMS1-206ENST00000414829 KIR2DS5A0A0G2JLQ3 304 aa14.44□□□□□ -0.1
LIMS1-206ENST00000414829 A0A0G2JNG1 304 aa14.44□□□□□ -0.1
LIMS1-206ENST00000414829 KIR2DS3K7RE56 304 aa14.44□□□□□ -0.1
LIMS1-206ENST00000414829 NUDT21O43809 227 aaKnown RBP14.44□□□□□ -0.1
LIMS1-206ENST00000414829 MTX2O75431 263 aa14.44□□□□□ -0.1
LIMS1-206ENST00000414829 URI1O94763 535 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-206ENST00000414829 TMEM63AO94886 807 aa14.44□□□□□ -0.1
LIMS1-206ENST00000414829 AP2A2O94973 939 aa14.44□□□□□ -0.1
LIMS1-206ENST00000414829 CELA2BP08218 269 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms