RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 UGT1A1P22309 533 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 UGT1A4P22310 534 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 ADRA1DP25100 572 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 UGT1A3P35503 534 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 UGT1A5P35504 534 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 COILP38432 576 aaPredicted RBP14.53□□□□□ -0.08
CHD1-202ENST00000414220 FNTAP49354 379 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 CLCNKAP51800 687 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 INSM1Q01101 510 aaPredicted RBP14.53□□□□□ -0.08
CHD1-202ENST00000414220 SPIDRQ14159 915 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 CCNI2Q6ZMN8 369 aaPredicted RBP14.53□□□□□ -0.08
CHD1-202ENST00000414220 NYAP1Q6ZVC0 841 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 NRROSQ86YC3 692 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 DDHD1Q8NEL9 900 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 PPHLN1Q8NEY8 458 aaKnown RBP14.53□□□□□ -0.08
CHD1-202ENST00000414220 OR13C4Q8NGS5 318 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 SH3KBP1Q96B97 665 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 RUNDC3BQ96NL0 473 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 TIMM29Q9BSF4 260 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 SYNDIG1Q9H7V2 258 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 UGT1A7Q9HAW7 530 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 UGT1A10Q9HAW8 530 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 UGT1A8Q9HAW9 530 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 SPATS2LQ9NUQ6 558 aaKnown RBP14.53□□□□□ -0.08
CHD1-202ENST00000414220 NLE1Q9NVX2 485 aaPredicted RBP14.53□□□□□ -0.08
CHD1-202ENST00000414220 BFARQ9NZS9 450 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 LRIT1Q9P2V4 623 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 RNF14Q9UBS8 474 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 PYCARDQ9ULZ3 195 aa14.53□□□□□ -0.08
CHD1-202ENST00000414220 DNMT3AQ9Y6K1 912 aaPredicted RBP14.53□□□□□ -0.08
CHD1-202ENST00000414220 LY6G6EA0A0G2JKS1 128 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 F8W8V4 182 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 TMX2-CTNND1H3BSU7 103 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 CHUKO15111 745 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 LDB2O43679 373 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 NOBOXO60393 691 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 ECEL1O95672 775 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 ZNF7P17097 686 aaPredicted RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 IDSP22304 550 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 MC4RP32245 332 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 PPARGP37231 505 aaPredicted RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 NPY2RP49146 381 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 PPM1FP49593 454 aaPredicted RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 ZNF140P52738 457 aaPredicted RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 MSLNQ13421 630 aaPredicted RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 NFATC2Q13469 925 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 HLTFQ14527 1009 aaKnown RBP eCLIP14.52□□□□□ -0.09
CHD1-202ENST00000414220 PTPRCAPQ14761 206 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 CYP1B1Q16678 543 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 ZRANB3Q5FWF4 1079 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 CERCAMQ5T4B2 595 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 ZNF648Q5T619 568 aaPredicted RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 GPRC6AQ5T6X5 926 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 PAPD7Q5XG87 772 aaKnown RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 CRTC3Q6UUV7 619 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 TAS2R42Q7RTR8 314 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 COG1Q8WTW3 980 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 PTCD2Q8WV60 388 aaKnown RBP14.52□□□□□ -0.09
CHD1-202ENST00000414220 PEX13Q92968 403 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 CCDC74AQ96AQ1 378 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 RANBP9Q96S59 729 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 COPS8Q99627 209 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 OSGEPL1Q9H4B0 414 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 CASS4Q9NQ75 786 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 KLC4Q9NSK0 619 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 KCNK6Q9Y257 313 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 PRKAB1Q9Y478 270 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 KCTD3Q9Y597 815 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.52□□□□□ -0.09
CHD1-202ENST00000414220 U3KQA8 63 aa14.52□□□□□ -0.09
CHD1-202ENST00000414220 SPTBN2O15020 2390 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.51□□□□□ -0.09
CHD1-202ENST00000414220 KIR2DS5A0A0G2JLQ3 304 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 A0A0G2JNG1 304 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 TMEM8BA6NDV4 472 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 H7C0S8 307 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 KIR2DS3K7RE56 304 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 SNX2O60749 519 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 MTX2O75431 263 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 TPSB2P20231 275 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 HALP42357 657 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 GPR3P46089 330 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 CACNG1Q06432 222 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 GPS1Q13098 491 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 TARDBPQ13148 414 aaKnown RBP eCLIP14.51□□□□□ -0.093e-8■■■■■ 28.2
CHD1-202ENST00000414220 KIR2DS5Q14953 304 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 PPP1R7Q15435 360 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 TPSAB1Q15661 275 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 PCID2Q5JVF3 399 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 LYPLAL1Q5VWZ2 237 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 UNQ6494/PRO21346Q6UXR6 183 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 RBM44Q6ZP01 1051 aaKnown RBP14.51□□□□□ -0.09
CHD1-202ENST00000414220 PRUNE1Q86TP1 453 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 SLC9B2Q86UD5 537 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 AMZ2Q86W34 360 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 ARL14Q8N4G2 192 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 BEND7Q8N7W2 519 aaPredicted RBP14.51□□□□□ -0.09
CHD1-202ENST00000414220 CDKN2AIPNLQ96HQ2 116 aa14.51□□□□□ -0.09
CHD1-202ENST00000414220 DNAJC1Q96KC8 554 aaKnown RBP14.51□□□□□ -0.09
CHD1-202ENST00000414220 GFM1Q96RP9 751 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms