RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 B4GALT6Q9UBX8 382 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ANAPC7Q9UJX3 599 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SOX13Q9UN79 622 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SNX9Q9Y5X1 595 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 C15orf38-AP3S2A0A0A6YYH1 394 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 IQANK1A0A1B0GTG1 560 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 CCDC78A2IDD5 438 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SCAMP1O15126 338 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 LPXNO60711 386 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 NIPSNAP2O75323 286 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 OR6B1O95007 311 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 INHBAP08476 426 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SMIM18P0DKX4 95 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 RALAP11233 206 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 KRT5P13647 590 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 AGXTP21549 392 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ARHGDIBP52566 201 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 MFAP3P55082 362 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 CDH8P55286 799 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 FMO1Q01740 532 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 MSLNQ13421 630 aaPredicted RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 GNA13Q14344 377 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 KCTD21Q4G0X4 260 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ATG16L1Q676U5 607 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SLC39A5Q6ZMH5 540 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 NCCRP1Q6ZVX7 275 aaPredicted RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 LRRC8DQ7L1W4 858 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ARPINQ7Z6K5 226 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 DEFB128Q7Z7B8 93 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 RTN4RL1Q86UN2 441 aaPredicted RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 RHOT1Q8IXI2 618 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF565Q8N9K5 539 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF671Q8TAW3 534 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 FNDC8Q8TC99 324 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 PRR11Q96HE9 360 aaPredicted RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ANKRD36BP1Q96IX9 119 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 GAD1Q99259 594 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 XYLT2Q9H1B5 865 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 LIN7BQ9HAP6 207 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SARS2Q9NP81 518 aaKnown RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 DNAJC28Q9NX36 388 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 MIOSQ9NXC5 875 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 R3HDM2Q9Y2K5 976 aaKnown RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SCN1AP35498 2009 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CHD9Q3L8U1 2897 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 SMIM28A0A1B0GU29 152 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 MAGEB16A2A368 324 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 TXNDC9O14530 226 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 PTGESO14684 152 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 HCRTO43612 131 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 SULT1B1O43704 296 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CCNT2O60583 730 aaKnown RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF189O75820 626 aaPredicted RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 TNFAIP8O95379 198 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 TNNC2P02585 160 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 FGF4P08620 206 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CES1P23141 567 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 ITGB8P26012 769 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 PTGS2P35354 604 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 EMP3P54852 163 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 RPL6Q02878 288 aaKnown RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 FOLH1Q04609 750 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 ELP6Q0PNE2 266 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 LRRC26Q2I0M4 334 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF699Q32M78 642 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 ATXN7L2Q5T6C5 722 aaPredicted RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 GARNL3Q5VVW2 1013 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CNKSR3Q6P9H4 555 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CPNE8Q86YQ8 564 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 PSTKQ8IV42 348 aaKnown RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 PALM2Q8IXS6 379 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CELF5Q8N6W0 485 aaKnown RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 HASPINQ8TF76 798 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 KTI12Q96EK9 354 aaPredicted RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 PAAF1Q9BRP4 392 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 SMYD3Q9H7B4 428 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 DPP3Q9NY33 737 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 SELENONQ9NZV5 590 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 ARMCX1Q9P291 453 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 HMGXB4Q9UGU5 601 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 RAB26Q9ULW5 256 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 DRG1Q9Y295 367 aaKnown RBP9.34□□□□□ -0.91
SNHG3-201ENST00000413987 NR2E3Q9Y5X4 410 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 POMT1Q9Y6A1 747 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 CLCA3PQ9Y6N3 262 aa9.34□□□□□ -0.91
SNHG3-201ENST00000413987 FAM234BA2RU67 622 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 HMX3A6NHT5 357 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 E9PBE3 544 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 F8W810 466 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TGM5O43548 720 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 CBFA2T3O75081 653 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SUPT3HO75486 399 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ASS1P00966 412 aaKnown RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 POMCP01189 267 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TFAP2AP05549 437 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms