RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZNF461Q8TAF7 563 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 S100A13Q99584 98 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 ZNF184Q99676 751 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 CLDND1Q9NY35 253 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SLC17A7Q9P2U7 560 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 FETUBQ9UGM5 382 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 TLL2Q9Y6L7 1015 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 JAG1P78504 1218 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 IRF5Q13568 498 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 NR1D2Q14995 579 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 TMEM220Q6QAJ8 160 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SNX20Q7Z614 316 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 AMIGO3Q86WK7 504 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SAMD14Q8IZD0 417 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 VPS35Q96QK1 796 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 RTKNQ9BST9 563 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SUV39H2Q9H5I1 410 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 GSTK1Q9Y2Q3 226 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 PNMA8CA0A1B0GUJ8 204 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 IDH2P48735 452 aaKnown RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SEC13P55735 322 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 ESRP1Q6NXG1 681 aaKnown RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 FAM220AQ7Z4H9 259 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 RPL10LQ96L21 214 aaKnown RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 ELOVL2Q9NXB9 296 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SAMD4AQ9UPU9 718 aaKnown RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 LYPLA1O75608 230 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 LRATO95237 230 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 BCL10O95999 233 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SOD2P04179 222 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 ADH5P11766 374 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SLC11A1P49279 550 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 TIGD2Q4W5G0 525 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 UBXN11Q5T124 520 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 FAAH2Q6GMR7 532 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 BRAT1Q6PJG6 821 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 HDDC3Q8N4P3 179 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 CMASQ8NFW8 434 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-202ENST00000413872 OVCA2Q8WZ82 227 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 RACGAP1Q9H0H5 632 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 PNPOQ9NVS9 261 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 SNX10Q9Y5X0 201 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
PHRF1-202ENST00000413872 PI15O43692 258 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 UROSP10746 265 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 MPP1Q00013 466 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 PTSQ03393 145 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 LGALS3BPQ08380 585 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 UBXN2BQ14CS0 331 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 CYP1B1Q16678 543 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 SNAP47Q5SQN1 464 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 MBLAC2Q68D91 279 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 FBXW8Q8N3Y1 598 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 RHOBTB2Q9BYZ6 727 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 CREBZFQ9NS37 354 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 MTRRQ9UBK8 725 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.34
PHRF1-202ENST00000413872 SNAP91O60641 907 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 MED26O95402 600 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 RPL4P36578 427 aaKnown RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 STXBP1P61764 594 aaKnown RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 DGKKQ5KSL6 1271 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 CPSF7Q8N684 471 aaKnown RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 REXO5Q96IC2 774 aaKnown RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 TRAPPC9Q96Q05 1148 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 MECRQ9BV79 373 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 MUC13Q9H3R2 512 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 RNPEPL1Q9HAU8 725 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 OR6B1O95007 311 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 CLCQ05315 142 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 UNC5BQ8IZJ1 945 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 FUKQ8N0W3 1084 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 TSTD1Q8NFU3 115 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 TSSK3Q96PN8 268 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 RSPH9Q9H1X1 276 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 LRMDAQ9H2I8 198 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 DPEP2Q9H4A9 486 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 LYVE1Q9Y5Y7 322 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 A0A0J9YYE9 177 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 WNT9AO14904 365 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 DLGAP3O95886 979 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 NDUFS1P28331 727 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 INCA1Q0VD86 236 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 MSANTD2Q6P1R3 559 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 RNF44Q7L0R7 432 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 CCDC103Q8IW40 242 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 AVL9Q8NBF6 648 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 LGALS13Q9UHV8 139 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 COL2A1P02458 1487 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 HAPLN1P10915 354 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 CACNA2D1P54289 1103 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 SYPL2Q5VXT5 272 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 TTC27Q6P3X3 843 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 GDPD4Q6W3E5 623 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 OR2T12Q8NG77 320 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 MAGEE2Q8TD90 523 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-202ENST00000413872 PYDC1Q8WXC3 89 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms