RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	CRYM	Q14894	314 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	SF3A2	Q15428	464 aa	Known RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	TEAD4	Q15561	434 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	PSAPL1	Q6NUJ1	521 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	UNC5A	Q6ZN44	842 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	SNX20	Q7Z614	316 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	ANKMY2	Q8IV38	441 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	DCLK2	Q8N568	766 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	PNPLA1	Q8N8W4	532 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	OR4L1	Q8NH43	312 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	IFT81	Q8WYA0	676 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	SCARF2	Q96GP6	870 aa	Predicted RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	FOXP3	Q9BZS1	431 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM96A	Q9H5X1	160 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	ERVMER34-1	Q9H9K5	563 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	ARFGAP3	Q9NP61	516 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	KLF15	Q9UIH9	416 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	CHMP2B	Q9UQN3	213 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	SLC17A4	Q9Y2C5	497 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	RPS6KL1	Q9Y6S9	549 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM169A	Q9Y6X4	670 aa		10.18	□□□□□ -0.78
ZNF3-205	ENST00000413658	SPEG	Q15772	3267 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	LNP1	A1A4G5	178 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	CACNB4	O00305	520 aa	Predicted RBP	10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	TNFRSF10C	O14798	259 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	KHNYN	O15037	678 aa	Known RBP	10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	MAGEC1	O60732	1142 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	VAPB	O95292	243 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	POLB	P06746	335 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	MYBL2	P10244	700 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	POLD2	P49005	469 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	C21orf59	P57076	290 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	B4GALNT1	Q00973	533 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	CACNG1	Q06432	222 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	FRG1	Q14331	258 aa	Known RBP	10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	SEMA3A	Q14563	771 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	SHB	Q15464	509 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	CSRP2	Q16527	193 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF423	Q2M1K9	1284 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	GPR33	Q49SQ1	333 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZRANB3	Q5FWF4	1079 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF648	Q5T619	568 aa	Predicted RBP	10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	GPRC6A	Q5T6X5	926 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	AFTPH	Q6ULP2	937 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	CENPU	Q71F23	418 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ADGRG6	Q86SQ4	1221 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	PHYKPL	Q8IUZ5	450 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	CCNJL	Q8IV13	435 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	IFT20	Q8IY31	132 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZBED8	Q8IZ13	594 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	UNC5B	Q8IZJ1	945 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	NXPE1	Q8N323	547 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	FBXO36	Q8NEA4	188 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	DDHD1	Q8NEL9	900 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	OR6P1	Q8NGX9	317 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	OR1E3	Q8WZA6	343 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	RUBCN	Q92622	972 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF669	Q96BR6	464 aa	Predicted RBP	10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	WDR92	Q96MX6	357 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	NAT9	Q9BTE0	207 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	NUSAP1	Q9BXS6	441 aa	Known RBP	10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZDHHC5	Q9C0B5	715 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ASB8	Q9H765	288 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	TRIM39	Q9HCM9	518 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	FGF22	Q9HCT0	170 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	SAYSD1	Q9NPB0	183 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	RXFP3	Q9NSD7	469 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	SEMA4G	Q9NTN9	838 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	IL1RAPL1	Q9NZN1	696 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ATXN10	Q9UBB4	475 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	NCDN	Q9UBB6	729 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	NFU1	Q9UMS0	254 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	TMEM98	Q9Y2Y6	226 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	SLC30A1	Q9Y6M5	507 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	GVINP1	Q7Z2Y8	2422 aa		10.17	□□□□□ -0.78
ZNF3-205	ENST00000413658	GOLGA8K	D6RF30	607 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	GOLGA8T	H3BQL2	631 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CD3EAP	O15446	510 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SGTA	O43765	313 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	DNAJC6	O75061	913 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	MTX2	O75431	263 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SLC25A14	O95258	325 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TTC4	O95801	387 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CSF2	P04141	144 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ENG	P17813	658 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ITGAL	P20701	1170 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ACRV1	P26436	265 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TNFRSF8	P28908	595 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	MAGEA4	P43358	317 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	THOP1	P52888	689 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SRP54	P61011	504 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TUBB4B	P68371	445 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PRAME	P78395	509 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PTK2B	Q14289	1009 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	DBN1	Q16643	649 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms