RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 FREM2Q5SZK8 3169 aa10.06□□□□□ -0.8
NCKIPSD-202ENST00000413374 PRAMEF33A0A0G2JMD5 474 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 GLYATL1P3A0A0U1RQE8 302 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 GOLGA6L9A6NEM1 432 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 A8MU76 341 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 MIF4GDA9UHW6 222 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 STX7O15400 261 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 JMJD7P0C870 316 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 TPH1P17752 444 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 HLA-DPA1P20036 260 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 HMGCLP35914 325 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 SPAM1P38567 509 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 ETV5P41161 510 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 GDF10P55107 478 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 PCBP4P57723 403 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 DCDC1P59894 354 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 HHEXQ03014 270 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 CFHR1Q03591 330 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 ZFP36L1Q07352 338 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 TMEM115Q12893 351 aaPredicted RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 PEX6Q13608 980 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 LRP8Q14114 963 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 SNAP47Q5SQN1 464 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 IYDQ6PHW0 289 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 DET1Q7L5Y6 550 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 SPACA3Q8IXA5 215 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 SFRP1Q8N474 314 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 ZNF248Q8NDW4 579 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 OR4K2Q8NGD2 314 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 KCNE4Q8WWG9 221 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 NCSTNQ92542 709 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 GRAMD1AQ96CP6 724 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 AHCYL2Q96HN2 611 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 SPATA13Q96N96 652 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 TTC25Q96NG3 672 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 SRPK1Q96SB4 655 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 TMEM121Q9BTD3 319 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 TRABDQ9H4I3 376 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 FAM96AQ9H5X1 160 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 RMI1Q9H9A7 625 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 LZTFL1Q9NQ48 299 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 PIH1D1Q9NWS0 290 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 SCHIP1Q9P0W5 487 aaPredicted RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 AAR2Q9Y312 384 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 PKP3Q9Y446 797 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 PCDHGA8Q9Y5G5 932 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 ANKRD36A6QL64 1941 aa10.05□□□□□ -0.8
NCKIPSD-202ENST00000413374 CELSR3Q9NYQ7 3312 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CACNA1BQ00975 2339 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 KMT2BQ9UMN6 2715 aaPredicted RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 IGHV1OR21-1A0A087WYE8 117 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 IGHV5-10-1A0A0J9YXX1 117 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 PDZK1P1A8MUH7 402 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 TMX2-CTNND1H3BSU7 103 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CCL22O00626 93 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 KMOO15229 486 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ZW10O43264 779 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 DXOO77932 396 aaKnown RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 METTL18O95568 372 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CPNE6O95741 557 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CCL4P13236 92 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ZNF7P17097 686 aaPredicted RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 RPL10P27635 214 aaKnown RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 SLC5A2P31639 672 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ADRA1AP35348 466 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 DRG2P55039 364 aaKnown RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 GSDMDP57764 484 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ERVPABLB-1P60509 514 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CXADRP78310 365 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 TLE3Q04726 772 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 GTF2H3Q13889 308 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 C16orf72Q14CZ0 275 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 KCTD19Q17RG1 926 aaPredicted RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 TMEM220Q6QAJ8 160 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 RANBP10Q6VN20 620 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ARHGEF18Q6ZSZ5 1173 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ZNF438Q7Z4V0 828 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 PRUNE1Q86TP1 453 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 SLC9B2Q86UD5 537 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 LRRTM4Q86VH4 590 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 TRAPPC5Q8IUR0 188 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ZNF547Q8IVP9 402 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 SLITRK4Q8IW52 837 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 RNF10Q8N5U6 811 aaKnown RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 OR13C4Q8NGS5 318 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 ZNF398Q8TD17 642 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 USP7Q93009 1102 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 LIN37Q96GY3 246 aaPredicted RBP10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 HES6Q96HZ4 224 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CCDC74BQ96LY2 380 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 PLEKHG4BQ96PX9 1271 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 TBL1YQ9BQ87 522 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 TBC1D10AQ9BXI6 508 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CPNE5Q9HCH3 593 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 HACD3Q9P035 362 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 KLHL3Q9UH77 587 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 FKBPLQ9UIM3 349 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms