RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 SLC13A4Q9UKG4 626 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 CDV3Q9UKY7 258 aaKnown RBP8.47□□□□□ -1.05
SYNE1-211ENST00000413186 RGS5O15539 181 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 C2P06681 752 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 ENO1P06733 434 aaKnown RBP8.47□□□□□ -1.05
SYNE1-211ENST00000413186 GNSP15586 552 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 NUP62P37198 522 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-211ENST00000413186 SLC10A2Q12908 348 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-211ENST00000413186 RAB6CQ53S08 254 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 DGKKQ5KSL6 1271 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 ANGPTL8Q6UXH0 198 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 DPY19L3Q6ZPD9 716 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 TCAIMQ8N3R3 496 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 ITFG1Q8TB96 612 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 RTP4Q96DX8 246 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 LINGO1Q96FE5 620 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 MED8Q96G25 268 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 MSANTD3Q96H12 275 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 ACE2Q9BYF1 805 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-211ENST00000413186 NLNQ9BYT8 704 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 RAB6CQ9H0N0 254 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 NEUROG2Q9H2A3 272 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 MAGEE1Q9HCI5 957 aa8.47□□□□□ -1.05
SYNE1-211ENST00000413186 AKAP7Q9P0M2 348 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-211ENST00000413186 H3BM21 787 aa8.46□□□□□ -1.05
SYNE1-211ENST00000413186 SLC31A1O15431 190 aa8.46□□□□□ -1.05
SYNE1-211ENST00000413186 KLF8O95600 359 aaPredicted RBP8.46□□□□□ -1.05
SYNE1-211ENST00000413186 AKIRIN2Q53H80 203 aa8.46□□□□□ -1.05
SYNE1-211ENST00000413186 CCDC157Q569K6 752 aa8.46□□□□□ -1.05
SYNE1-211ENST00000413186 WASHC2DQ5SRD0 308 aa8.46□□□□□ -1.05
SYNE1-211ENST00000413186 ERN2Q76MJ5 926 aaKnown RBP8.46□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF366Q8N895 744 aa8.46□□□□□ -1.05
SYNE1-211ENST00000413186 ISG20Q96AZ6 181 aaKnown RBP8.46□□□□□ -1.05
SYNE1-211ENST00000413186 AHCYL2Q96HN2 611 aaKnown RBP8.46□□□□□ -1.05
SYNE1-211ENST00000413186 SCML1Q9UN30 329 aa8.46□□□□□ -1.05
SYNE1-211ENST00000413186 AGPSO00116 658 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 B4GALT3O60512 393 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 PIGNO95427 931 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 FYNP06241 537 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 ZDHHC11BP0C7U3 371 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 BGNP21810 368 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 HOXC13P31276 330 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 FAM78AQ5JUQ0 283 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 LYSMD3Q7Z3D4 306 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 MILR1Q7Z6M3 343 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 NPWQ8N729 165 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 RASSF5Q8WWW0 418 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 GLMNQ92990 594 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 OLFM3Q96PB7 478 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 CCDC3Q9BQI4 270 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 CACNA2D2Q9NY47 1150 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 ZDHHC3Q9NYG2 299 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 WARS2Q9UGM6 360 aaKnown RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 ASF1AQ9Y294 204 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 TRIP12Q14669 1992 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 TSPAN6O43657 245 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 MLYCDO95822 493 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 PCCBP05166 539 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 DRD4P21917 467 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 HNRNPH1P31943 449 aaKnown RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 CD70P32970 193 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 MAD2L1Q13257 205 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 FASTKD3Q14CZ7 662 aaKnown RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 NDUFA5Q16718 116 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 EIF2S3LQ2VIR3 472 aaKnown RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 GRAMD1BQ3KR37 738 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 KHDRBS2Q5VWX1 349 aaKnown RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 CRTC3Q6UUV7 619 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 RALGPS2Q86X27 583 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-211ENST00000413186 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 ZBTB2Q8N680 514 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 JADE3Q92613 823 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 ROGDIQ9GZN7 287 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 DCLRE1BQ9H816 532 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 GID8Q9NWU2 228 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 TAGLN3Q9UI15 199 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 C16orf96A6NNT2 1141 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 VPS4BO75351 444 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 HLA-EP13747 358 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 EPB42P16452 691 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 IFNA8P32881 189 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 PBX2P40425 430 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 SLC18A1P54219 525 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 ARF5P84085 180 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 RASA2Q15283 850 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 METTL6Q8TCB7 284 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 KCTD4Q8WVF5 259 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 TRMOQ9BU70 441 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 KIFC1Q9BW19 673 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 WDR26Q9H7D7 661 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 OSER1Q9NX31 292 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 MTMR10Q9NXD2 777 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 IL37Q9NZH6 218 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 SLCO3A1Q9UIG8 710 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 A0A0G2JMZ2 1700 aa8.46□□□□□ -1.06
SYNE1-211ENST00000413186 CEP290O15078 2479 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 LEFTY1O75610 366 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 UBOX5O94941 541 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 AMD1P17707 334 aa8.45□□□□□ -1.06
SYNE1-211ENST00000413186 SLC1A6P48664 564 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms