RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ACTR2P61160 394 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SLC1A5Q15758 541 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 AAK1Q2M2I8 961 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 PARP15Q460N3 678 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 FLYWCH1Q4VC44 716 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 LIPNQ5VXI9 398 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 POTEAQ6S8J7 498 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 CREB3L2Q70SY1 520 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 MCATQ8IVS2 390 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 TIGD4Q8IY51 512 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 CENPLQ8N0S6 344 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 RP9Q8TA86 221 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 SIPA1Q96FS4 1042 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 OR5M11Q96RB7 305 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TMEM121Q9BTD3 319 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 OSBPL11Q9BXB4 747 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ANKRD60Q9BZ19 345 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ROGDIQ9GZN7 287 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TOR3AQ9H497 397 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TRABDQ9H4I3 376 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 FBXO8Q9NRD0 319 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SNX15Q9NRS6 342 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ZFP57Q9NU63 452 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ZNF224Q9NZL3 707 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 CCDC59Q9P031 241 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 MIOXQ9UGB7 285 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ACSL5Q9ULC5 683 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 UBR2Q8IWV8 1755 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 E2F8A0AVK6 867 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 EML1O00423 815 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RGS5O15539 181 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 PSTPIP1O43586 416 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 GRIN3BO60391 1043 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 CABYRO75952 493 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 FAM13AO94988 1023 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 APOA1P02647 267 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 HRGP04196 525 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 BMP1P13497 986 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ZNF8P17098 575 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 NELFEP18615 380 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 MATN1P21941 496 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ETV4P43268 484 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 GDF10P55107 478 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RAB4BP61018 213 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ACTR1AP61163 376 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 MAPK11Q15759 364 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TYSND1Q2T9J0 566 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TMEM67Q5HYA8 995 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RARS2Q5T160 578 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 FAM182AQ5T1J6 154 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SLC25A24Q6NUK1 477 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SV2AQ7L0J3 742 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 MICU3Q86XE3 530 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 CDKL3Q8IVW4 592 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 NIM1KQ8IY84 436 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ZDHHC14Q8IZN3 488 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SIX6OS1Q8N1H7 587 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 CELF2-AS1Q8N7Q2 184 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TTC29Q8NA56 475 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 CLHC1Q8NHS4 586 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 LRRC15Q8TF66 581 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 DLG3Q92796 817 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 C7orf34Q96L11 122 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 MANSC1Q9H8J5 431 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ING3Q9NXR8 418 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 NXF1Q9UBU9 619 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 BTNL2Q9UIR0 455 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 AFG3L2Q9Y4W6 797 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 PCDHB5Q9Y5E4 795 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TAF1LQ8IZX4 1826 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 PRSS51A0A1B0GVH4 220 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 UBE2Q2LH0YL09 131 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 FSCN2O14926 492 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SLC22A5O76082 557 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RASAL1O95294 804 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 F9P00740 461 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 GSNP06396 782 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 IL7P13232 177 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RPL10P27635 214 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 LAP3P28838 519 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RPA3P35244 121 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 TAGLN2P37802 199 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 PPP3CCP48454 512 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 NT5C2P49902 561 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ARL4CP56559 192 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RIPPLY1Q0D2K3 151 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 FAAP100Q0VG06 881 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 RAET1GQ6H3X3 334 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ZNF574Q6ZN55 896 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 SLC26A9Q7LBE3 791 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ARL14Q8N4G2 192 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 BANPQ8N9N5 519 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 PSMA8Q8TAA3 256 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 GATAD2BQ8WXI9 593 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TCEAL3Q969E4 200 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 HSFY1Q96LI6 401 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 PIGSQ96S52 555 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 LGMNQ99538 433 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ZSWIM1Q9BR11 485 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms