RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PYGLP06737 847 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF37AP17032 561 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 C5AR1P21730 350 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 SETMARQ53H47 684 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 GPRC6AQ5T6X5 926 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 AGAP9Q5VTM2 703 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 KLC3Q6P597 504 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 NAPRTQ6XQN6 538 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 TMPRSS6Q8IU80 811 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 FLCNQ8NFG4 579 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 OR2T3Q8NH03 318 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 NUS1Q96E22 293 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 COPS8Q99627 209 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ELAC2Q9BQ52 826 aaKnown RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 PITPNM3Q9BZ71 974 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ZDHHC3Q9NYG2 299 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 TRMT6Q9UJA5 497 aaKnown RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 GNPTGQ9UJJ9 305 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 FADS3Q9Y5Q0 445 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 G3V2L1 256 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 H0Y858 1186 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 ZBTB14O43829 449 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 WISP3O95389 354 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 MYL2P10916 166 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 SUOXP51687 545 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 ADARP55265 1226 aaKnown RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 DCDC1P59894 354 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 ILF2Q12905 390 aaKnown RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 TSNAXIP1Q2TAA8 658 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 HENMT1Q5T8I9 393 aaKnown RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 AGBL4Q5VU57 503 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 CES4AQ5XG92 561 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 TRMT11Q7Z4G4 463 aaKnown RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 PELI3Q8N2H9 469 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 TRAM1L1Q8N609 369 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 GIMAP7Q8NHV1 300 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 LKAAEAR1Q8TD35 194 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 EXT2Q93063 718 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 DTD2Q96FN9 168 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 UBXN10Q96LJ8 280 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 COQ10AQ96MF6 247 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 NSRP1Q9H0G5 558 aaKnown RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 ALG9Q9H6U8 611 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 ZNF395Q9H8N7 513 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 FBXL12Q9NXK8 326 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-204ENST00000409727 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 CKAP5Q14008 2032 aa12.33□□□□□ -0.44
CHMP3-204ENST00000409727 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 H3BMM5 538 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 K7ESM1 405 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 PSMD11O00231 422 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 BIRC5O15392 142 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 SLC25A14O95258 325 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 DNTTP04053 509 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 SBK3P0C264 359 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 TFEBP19484 476 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 RPS3P23396 243 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 NSG1P42857 185 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 TAS2R38P59533 333 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 MRPS21P82921 87 aaKnown RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 B4GALNT1Q00973 533 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 BST1Q10588 318 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 OVGP1Q12889 678 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 TMEM52BQ4KMG9 183 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 ZNF771Q7L3S4 317 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 FAM124AQ86V42 546 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 LCA5Q86VQ0 697 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 CPNE9Q8IYJ1 553 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 TMEM151AQ8N4L1 468 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 CD200R1Q8TD46 325 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 KCNJ9Q92806 393 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 RAB7BQ96AH8 199 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 MOCOSQ96EN8 888 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 DCUN1D1Q96GG9 259 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 ZSCAN5AQ9BUG6 496 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 MRPL46Q9H2W6 279 aaKnown RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 POPDC3Q9HBV1 291 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 SLC2A4RGQ9NR83 387 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 RAD18Q9NS91 495 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 SIRPGQ9P1W8 387 aa12.32□□□□□ -0.44
CHMP3-204ENST00000409727 MBD1Q9UIS9 605 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 OAS3Q9Y6K5 1087 aaKnown RBP12.32□□□□□ -0.44
CHMP3-204ENST00000409727 IGLON5A6NGN9 336 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 APOA4P06727 396 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 FGF3P11487 239 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 CD1DP15813 335 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 CLCN7P51798 805 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 CCINQ13939 588 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 MLF2Q15773 248 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 KHDC1Q4VXA5 237 aaKnown RBP12.31□□□□□ -0.44
CHMP3-204ENST00000409727 TECRLQ5HYJ1 363 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 RAET1GQ6H3X3 334 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 ZYG11AQ6WRX3 759 aa12.31□□□□□ -0.44
CHMP3-204ENST00000409727 Q6ZS52 159 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms